Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g03984 ATGGTTGCCCATGTGGCAGATTTTGGATTGGCAAGGTTTCTCTCTCAAAATCCATCTGAGAAACATAGCAGCACTCTAGAATTGAAGGGATCAATCGGCTATATCGCCCCAGAATTTGGTCTGGGTGGAAAGGCTTCAACTAGTGGTGATGTGTACAGTTTTGGAATCCTACTTCTAGAGATGTTCATAGTCAAAAAACCAACTGATGGAATTTTCGAAGAAGCATTAAGCTTGAACAAATTTGTATCAGACATGGATGACAAGCAACTGCTGAATGTTGTTGATCAAAGGCTTATCGCTGGCGATTGTCATAGCAGTAATTCGACTGGCGACAACAGCTATAGTAACGGCAAAACAGATTGGATGCACAAAGCTGAGGAGTGCATAGCTGCTGCAATGAGAGTTGGCTTGTCATGTGTAGCATATCATCCTAAAGATCGGTGGACAATGAGGGAAGCCGTATCAAAATTGCATGGAATTAAGCAGTCTATACTAGGCTTATGA 504 0.4226 MVAHVADFGLARFLSQNPSEKHSSTLELKGSIGYIAPEFGLGGKASTSGDVYSFGILLLEMFIVKKPTDGIFEEALSLNKFVSDMDDKQLLNVVDQRLIAGDCHSSNSTGDNSYSNGKTDWMHKAEECIAAAMRVGLSCVAYHPKDRWTMREAVSKLHGIKQSILGL 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g03984 167 Gene3D Transferase(Phosphotransferase) domain 1 1 164 - -
Trre5g03984 167 Pfam Protein tyrosine and serine/threonine kinase 2 156 IPR001245 GO:0004672|GO:0006468
Trre5g03984 167 SUPERFAMILY Protein kinase-like (PK-like) 2 160 IPR011009 -
Trre5g03984 167 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 1 162 - -
Trre5g03984 167 ProSiteProfiles Protein kinase domain profile. 1 161 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g03984 Trre-Chr5 41076477 41077088 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g03984 1 165 Receptor kinase-like Gene Family AT3G47110 37.278 3.89e-30 113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Trre5g03984 PK_Tyr_Ser-Thr 2.1e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g03984 - - mtr:11428205 258.84