Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g03965 ATGGCTAGTTTCCACCACCAACCACAGATTGAAGAGATTTTGACACAATCACATTTCGTTTTTCACTCAGAATCTCCCAACAACCGGAAAGTGGTAAAACCCTTCACAAAATTCCTTTTCATCGATTCATATCTAACAGTGAAAGAAAAAAAAATGGCTTCAGATCCAAAGCTTCACACTTTCGATGAGGTGTCAAAGCACAACAAGACCAAAGATTGCTGGCTTATTCTTTCTGGAAAGGTGTATGATGTCACCCCTTTTATGGAGGATCATCCCGGAGGTGATGAGGTTCTGTTGTCTGCAACAGGGAAGGATGCAACCAATGATTTTGAAGATGTTGGACACAGTGATTCTGCTAGAGAAATGATGGACAAATACTACATTGGTGAGATTGATCCATCAACTGTGCCATTAAAGCGCTCCTACGTTCCACCTCAGCAATCTCAGTACAACCCTGACAAGACTTCGGAATTTGTGATCAAGATTTTGCAGTTCCTGGTGCCACTCCTGATATTGGGATTGGCCTTTGTTGTCCGAAACTACACCAAGAAAGAAGAGTAG 561 0.4207 MASFHHQPQIEEILTQSHFVFHSESPNNRKVVKPFTKFLFIDSYLTVKEKKMASDPKLHTFDEVSKHNKTKDCWLILSGKVYDVTPFMEDHPGGDEVLLSATGKDATNDFEDVGHSDSAREMMDKYYIGEIDPSTVPLKRSYVPPQQSQYNPDKTSEFVIKILQFLVPLLILGLAFVVRNYTKKEE 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g03965 186 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 54 144 IPR036400 -
Trre5g03965 186 PRINTS Cytochrome B5 signature 91 105 IPR001199 -
Trre5g03965 186 PRINTS Cytochrome B5 signature 106 113 IPR001199 -
Trre5g03965 186 PRINTS Cytochrome B5 signature 81 91 IPR001199 -
Trre5g03965 186 PRINTS Cytochrome B5 signature 119 131 IPR001199 -
Trre5g03965 186 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 56 132 IPR001199 -
Trre5g03965 186 PANTHER CYTOCHROME B5 50 183 - -
Trre5g03965 186 SMART Cyt_b5_2 59 132 IPR001199 -
Trre5g03965 186 Pfam Cytochrome b5-like Heme/Steroid binding domain 61 131 IPR001199 -
Trre5g03965 186 FunFam Cytochrome b5 type B 53 136 - -
Trre5g03965 186 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 87 94 IPR018506 GO:0020037
Trre5g03965 186 Gene3D - 48 137 IPR036400 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g03965 Trre-Chr5 40798025 40800391 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g03965 52 185 NADPH P450 reductases AT5G53560 79.851 1.21e-79 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g03965 K23490 - sind:105166769 254.603