Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g03941 ATGGCTTTTACATCAACTGCTCTACAATATTCGTCCACATCATACTTACAATCCTGGGTACCTTCTTTAGAAGGTAAAAATGATCATAATTCATGGTGTGTCAGAGTGAGATCATACAAACCCACTTCTCAAAGATTACACCAACAGAACTTTGCAAGAGGACTAACAATCATGAGCGCGGCCACAAAACCAGCGAAATCACCAGCTGAAGAAGAATGGAAGGTTAAGAGAGAATTACTTCTGCAGAAAAGGGTAAAAAGTGTCGAACCAAAGGAAGCTCTGCGCCTTCAAAAAGAAAATAATTTTGTGATTCTTGATGTAAGGCCAGAAGCAGAGTTCAAGGAGGCTCATCCTCCAGATGCCATTAATGTGCAAGTATACAGACTTATAAAAGAATGGACAGCCTGGGATATTGCCAGACGCGCTGCTTTTGCATTTTTTGGTATTTTCTCTGGCACAGAAGAGAACCCCGAGTTTATCAAGTCTGTTGAGGAAAAATTAAATAAAAATGCAAAGATAATTGTAGCTTGCTCAGCAGGGGGAACAATGAAACCAACACAAAATCTGCCACAAGGTCAACAATCTAGGTCTCTAATAGCAGCTTACTTGCTGGTCCTAAATGGTTACAACAATGTCTTCCATCTAGATGGTGGGCTTTACAAGTGGTTTAAAGAGGATCTGCCAAGTGTTTCAGACTCGGAGGAGTGA 708 0.4082 MAFTSTALQYSSTSYLQSWVPSLEGKNDHNSWCVRVRSYKPTSQRLHQQNFARGLTIMSAATKPAKSPAEEEWKVKRELLLQKRVKSVEPKEALRLQKENNFVILDVRPEAEFKEAHPPDAINVQVYRLIKEWTAWDIARRAAFAFFGIFSGTEENPEFIKSVEEKLNKNAKIIVACSAGGTMKPTQNLPQGQQSRSLIAAYLLVLNGYNNVFHLDGGLYKWFKEDLPSVSDSEE 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g03941 235 ProSiteProfiles Rhodanese domain profile. 98 231 IPR001763 -
Trre5g03941 235 Pfam Rhodanese-like domain 90 223 IPR001763 -
Trre5g03941 235 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 83 230 IPR036873 -
Trre5g03941 235 CDD RHOD 92 222 - -
Trre5g03941 235 Gene3D - 84 234 IPR036873 -
Trre5g03941 235 FunFam Rhodanese-like domain-containing protein 14, chloroplastic 72 230 - -
Trre5g03941 235 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 14, CHLOROPLASTIC-RELATED 31 232 IPR043186 -
Trre5g03941 235 SMART rhod_4 88 228 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g03941 Trre-Chr5 40644411 40646629 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g03941 55 228 Sulfurtransferasese or Rhodanese AT4G27700 78.161 1.31e-100 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g03941 - - gmx:100788147 384.8