Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g03803 ATGGAGTGCAACAAAGATGAGGCAGTTAGGGCCAAAGAAATAGCAGAGAGGAAATTTTCTGAAAGGGAATATATCGGTTCAAAGAAGTTTGCTCTCAAGGCTCAAAATTTGTATCCTGATTTGGAGGATATTTCCCAGTTTTTGACGACTATTGATATTTATATATCTGCCGAGAACAAAGTAAGTGGAGAAATGGATTGGTATGGTATACTTGGAGTGAGCCCCTTTGCTGATGAAGAGACTGTTAGAAAGCAATACAGGAAGCTGGCTCTCACCCTTCACCCGGACAAAAACAAGTCTTTAGGTGCAGAGGGTGCATTTAAGCTGGTTTCAGAGGCATGGAGTTTGTTATCAGATAAGACCAAAAGACTAGAATATAACCAGAAGAGGAGTTTGAAAACCTTCCAACATACTACTCCCAACCGTGCTGGGCATCCATCCAATGTACCCACTTCAAATGGTTATTATCATTTTAAGAAGAATGCAACTTCAAACGCGAGGACTGGGAATAATCAATCTCGGGCTCCTTCGGCTTCTGTCCCCCCTCCACAGAAAAAGGCTGAAACCTTTTGGACGCTCTGTAATAAATGCCGGACACATTATGAATATCTCAGAGTTTATTTGAATCACACCCTTTTATGTCCCAACTGTAATGAAGCTTTTGTGGCTGTAGAGAGGGGTCCTCCTCCCAATGTTTTTAAGCCATCAAATTTGCCCTCCCATCAACAGCACCAGAATTCTCGACGCCATGCTGGAAGTAATAATTCAAACCTTCAGTGGGGTTCCCAGTCCAGAATGGCTGGTTTTGGTAGCACAGATGGATCCTCATCTGTTGCCGCTCAAGCTGCAAGTGTTGTGCAGAAAGCAAGTGAGAAAGTAAAGAGAGAAGGAGCACCATCAATTGCTGAATGGGAGAGGATTCAAATGTCTAAGAAAGCTGATGGTTCTATGAAGAAAAGGAAGACAGATGATGTTCGCGTTAATGGTTTTCCAGGATATATGTCAAATCAAATGGCTACGGGACATGGAGCAGCAGGTTTGGGCAGTTTCTCTGATCCAGGAAAGACTAACTTGGAGAAAGGAAGGACTTGCGGTTTTTCAGGTCTTGCTGGCAAGCAGCATTACAGCATGCGAGAGTTGTCAATGTTTGAGTTACGAAACATGTTGATGGATAAGTCACGAAATGAAATTCGCAAGGAACTTGAAGAGTTGAGGTTAAAGGCTGAAGCTAAGATTACTAACAAGAACAAAGAGGGTAAGAGACTGAAAAGCACATTTAATGGCAAAACAACTGGTTCAGAGAAATACGGAGAGTCGAATGTTAATGGCAATAAGCATTTTGATGTTGATTCTTTACCTGTCACATCTGATGATACGGTTAAGAAGAGCCAAGCCTATGTTACAATCAATGTTCCGGATCCTGATTTTCACAATTTTGACCAGGATAGAGCTGAAGGTTCCTTCGCAGAGGACCAGGTCTGGGCTGCTTATGATGATGACGATGGAATGCCCAGATATTATGCTAGAATTCACAAGGTGATCTCCCTAAAGCCATTTAGAATGCGGATCAGTTGGCTTAACTCTCGAAGCAACAGTGAATTGGGCCCAATAGATTGGGTAGGTTCTGGTTTTTATAAAACTTGTGGGGATTTCAGGACTGGCAAGCATGAAGTAACTGAATCATTAAATTCGTTTTCACACAAGGTTAGGTGGACAAAAGGTACCAGAGGAGTTGTCCGCATCTTTCCTGGCAAGGGAGAAGTCTGGGCACTTTATAGAAACTGGTCTCCTGATTGGAATGAACATACTCCGGATGATGTGATACACAAGTATGACATGGTGGAAGTGCTTGATGACTTCAATGAAGAGCAAGGTATATTAGTTACTCCCCTTGTCAAGTCTCCTGGCTTTAGGACAGTATTCCAAAGGCACAACGACCATAATGAGGTTAGAAGGATTCCTAAAGAGGAGATGTTTCGATTCTCTCATCAGGTTCCTAATCACTTGCTCAGTGGCCTAGAAGCTCATAATGCTCCAATAGGTTGTAGAGAGTTGGATCCAGCAGCTACTCCTTTAGACCTCCTTCAGATAGAAACAGAAGCTAATGAGGCAGCAGGTAATGTTTAG 2127 0.4269 MECNKDEAVRAKEIAERKFSEREYIGSKKFALKAQNLYPDLEDISQFLTTIDIYISAENKVSGEMDWYGILGVSPFADEETVRKQYRKLALTLHPDKNKSLGAEGAFKLVSEAWSLLSDKTKRLEYNQKRSLKTFQHTTPNRAGHPSNVPTSNGYYHFKKNATSNARTGNNQSRAPSASVPPPQKKAETFWTLCNKCRTHYEYLRVYLNHTLLCPNCNEAFVAVERGPPPNVFKPSNLPSHQQHQNSRRHAGSNNSNLQWGSQSRMAGFGSTDGSSSVAAQAASVVQKASEKVKREGAPSIAEWERIQMSKKADGSMKKRKTDDVRVNGFPGYMSNQMATGHGAAGLGSFSDPGKTNLEKGRTCGFSGLAGKQHYSMRELSMFELRNMLMDKSRNEIRKELEELRLKAEAKITNKNKEGKRLKSTFNGKTTGSEKYGESNVNGNKHFDVDSLPVTSDDTVKKSQAYVTINVPDPDFHNFDQDRAEGSFAEDQVWAAYDDDDGMPRYYARIHKVISLKPFRMRISWLNSRSNSELGPIDWVGSGFYKTCGDFRTGKHEVTESLNSFSHKVRWTKGTRGVVRIFPGKGEVWALYRNWSPDWNEHTPDDVIHKYDMVEVLDDFNEEQGILVTPLVKSPGFRTVFQRHNDHNEVRRIPKEEMFRFSHQVPNHLLSGLEAHNAPIGCRELDPAATPLDLLQIETEANEAAGNV 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g03803 708 MobiDBLite consensus disorder prediction 232 274 - -
Trre5g03803 708 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Trre5g03803 708 Pfam Domain of unknown function (DUF3444) 468 672 IPR024593 -
Trre5g03803 708 MobiDBLite consensus disorder prediction 236 274 - -
Trre5g03803 708 ProSitePatterns Nt-dnaJ domain signature. 107 126 IPR018253 -
Trre5g03803 708 MobiDBLite consensus disorder prediction 422 442 - -
Trre5g03803 708 MobiDBLite consensus disorder prediction 425 442 - -
Trre5g03803 708 PRINTS DnaJ domain signature 102 122 IPR001623 -
Trre5g03803 708 PRINTS DnaJ domain signature 86 101 IPR001623 -
Trre5g03803 708 PRINTS DnaJ domain signature 68 86 IPR001623 -
Trre5g03803 708 SUPERFAMILY Chaperone J-domain 57 126 IPR036869 -
Trre5g03803 708 Gene3D DnaJ domain 63 175 IPR036869 -
Trre5g03803 708 Coils Coil 394 418 - -
Trre5g03803 708 CDD DnaJ 66 119 IPR001623 -
Trre5g03803 708 PANTHER BNAC03G44070D PROTEIN 1 691 - -
Trre5g03803 708 Pfam DnaJ domain 66 127 IPR001623 -
Trre5g03803 708 MobiDBLite consensus disorder prediction 134 184 - -
Trre5g03803 708 SMART dnaj_3 65 122 IPR001623 -
Trre5g03803 708 MobiDBLite consensus disorder prediction 134 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g03803 Trre-Chr5 38640044 38642170 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g03803 4 229 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 32.051 1.22e-29 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g03803 - - cam:101501612 1254.2