Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g03802 ATGATGGAGTGCAACAAAGATGAGGCAGTTAGGGCCAAAGAAATAGCAGAGAGGAAATTTTCTGAAAGGGAATATATCGGTTCAAAGAAGTTTGCTCTCAAGGCTCAAAATTTGTATCCTGATTTGGAGGATATTTCCCAGTTTTTGACGACTATTGATATTTATATATCTGCCGAGAACAAAGTAAGTGGAGAAATGGATTGGTATGGTATACTTGGAGTGAGCCCCTTTGCTGATGAAGAGACTGTTAGAAAGCAATACAGGAAGCTGGCTCTCACCCTTCACCCGGACAAAAACAAGTCTTTAGGTGCAGAGGGTGCATTTAAGCTGGTTTCAGAGGCATGGAGTTTGTTATCAGATAAGACCAAAAGACTAGAATATAACCAGAAGAGGAGTTTGAAAACCTTCCAACATACTACTCCCAACCGTGCTGGGCATCCATCCAATGTACCCACTTCAAATGGTTATTATCATTTTAAGAAGAATGCAACTTCAAACGCGAGGACTGGGAATAATCAATCTCGGGCTCCTTCGGCTTCTGTCCCCCCTCCACAGAAAAAGGCTGAAACCTTTTGGACGCTCTGTAATAAATGCCGGACACATTATGAATATCTCAGAGTTTATTTGAATCACACCCTTTTATGTCCCAACTGTAATGAAGCTTTTGTGGCTGTAGAGAGGGGTCCTCCTCCCAATGTTTTTAAGCCATCAAATTTGCCCTCCCATCAACAGCACCAGAATTCTCGACGCCATGCTGGAAGTAATAATTCAAACCTTCAGTGGGGTTCCCAGTCCAGAATGGCTGGTTTTGGTAGCACAGATGGATCCTCATCTGTTGCCGCTCAAGCTGCAAGTGTTGTGCAGAAAGCAAGTGAGAAAGTAAAGAGAGAAGGAGCACCATCAATTGCTGAATGGGAGAGGATTCAAATGTCTAAGAAAGCTGATGGTTCTATGAAGAAAAGGAAGACAGATGATGTTCGCGTTAATGGTTTTCCAGGATATATGTCAAATCAAATGGCTACGGGACATGGAGCAGCAGGTTTGGGCAGTTTCTCTGATCCAGGAAAGACTAACTTGGAGAAAGGAAGGACTTGCGGTTTTTCAGGTCTTGCTGGCAAGCAGCATTACAGCATGCGAGAGTTGTCAATGTTTGAGTTACGAAACATGTTGATGGATAAGTCACGAAATGAAATTCGCAAGGAACTTGAAGAGTTGAGGTTAAAGGCTGAAGCTAAGATTACTAACAAGAACAAAGAGGGTAAGAGACTGAAAAGCACATTTAATGGCAAAACAACTGGTTCAGAGAAATACGGAGAGTCGAATGTTAATGGCAATAAGCATTTTGATGTTGATTCTTTACCTGTCACATCTGATGATACGGTTAAGAAGAGCCAAGCCTATGTTACAATCAATGTTCCGGATCCTGATTTTCACAATTTTGACCAGGATAGAGCTGAAGGTTCCTTCGCAGAGGACCAGGTCTGGGCTGCTTATGATGATGACGATGGAATGCCCAGATATTATGCTAGAATTCACAAGGTGATCTCCCTAAAGCCATTTAGAATGCGGATCAGTTGGCTTAACTCTCGAAGCAACAGTGAATTGGGCCCAATAGATTGGGTAGGTTCTGGTTTTTATAAAACTTGTGGGGATTTCAGGACTGGCAAGCATGAAGTAACTGAATCATTAAATTCGTTTTCACACAAGGTTAGGTGGACAAAAGGTACCAGAGGAGTTGTCCGCATCTTTCCTGGCAAGGGAGAAGTCTGGGCACTTTATAGAAACTGGTCTCCTGATTGGAATGAACATACTCCGGATGATGTGATACACAAGTATGACATGGTGGAAGTGCTTGATGACTTCAATGAAGAGCAAGGTATATTAGTTACTCCCCTTGTCAAGTCTCCTGGCTTTAGGACAGTATTCCAAAGGCACAACGACCATAATGAGGTTAGAAGGATTCCTAAAGAGGAGATGTTTCGATTCTCTCATCAGGTTCCTAATCACTTGCTCAGTGGCCTAGAAGCTCATAATGCTCCAATAGGTTGTAGAGAGTTGGATCCAGCAGCTACTCCTTTAGACCTCCTTCAGATAGAAACAGAAGCTAATGAGGCAGCAGAAATGTTCAAACGAGGATGGGAAACAAAAAATGGGATCGTAGATGACAATGCACAACATGGTGTGACTTTTTATGCAATAGGATTTGGAAACTAA 2214 0.4246 MMECNKDEAVRAKEIAERKFSEREYIGSKKFALKAQNLYPDLEDISQFLTTIDIYISAENKVSGEMDWYGILGVSPFADEETVRKQYRKLALTLHPDKNKSLGAEGAFKLVSEAWSLLSDKTKRLEYNQKRSLKTFQHTTPNRAGHPSNVPTSNGYYHFKKNATSNARTGNNQSRAPSASVPPPQKKAETFWTLCNKCRTHYEYLRVYLNHTLLCPNCNEAFVAVERGPPPNVFKPSNLPSHQQHQNSRRHAGSNNSNLQWGSQSRMAGFGSTDGSSSVAAQAASVVQKASEKVKREGAPSIAEWERIQMSKKADGSMKKRKTDDVRVNGFPGYMSNQMATGHGAAGLGSFSDPGKTNLEKGRTCGFSGLAGKQHYSMRELSMFELRNMLMDKSRNEIRKELEELRLKAEAKITNKNKEGKRLKSTFNGKTTGSEKYGESNVNGNKHFDVDSLPVTSDDTVKKSQAYVTINVPDPDFHNFDQDRAEGSFAEDQVWAAYDDDDGMPRYYARIHKVISLKPFRMRISWLNSRSNSELGPIDWVGSGFYKTCGDFRTGKHEVTESLNSFSHKVRWTKGTRGVVRIFPGKGEVWALYRNWSPDWNEHTPDDVIHKYDMVEVLDDFNEEQGILVTPLVKSPGFRTVFQRHNDHNEVRRIPKEEMFRFSHQVPNHLLSGLEAHNAPIGCRELDPAATPLDLLQIETEANEAAEMFKRGWETKNGIVDDNAQHGVTFYAIGFGN 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g03802 737 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Trre5g03802 737 MobiDBLite consensus disorder prediction 237 275 - -
Trre5g03802 737 PANTHER BNAC03G44070D PROTEIN 2 692 - -
Trre5g03802 737 Pfam DnaJ domain 67 128 IPR001623 -
Trre5g03802 737 SMART dnaj_3 66 123 IPR001623 -
Trre5g03802 737 Pfam Domain of unknown function (DUF3444) 469 673 IPR024593 -
Trre5g03802 737 ProSitePatterns Nt-dnaJ domain signature. 108 127 IPR018253 -
Trre5g03802 737 Coils Coil 395 419 - -
Trre5g03802 737 CDD DnaJ 67 120 IPR001623 -
Trre5g03802 737 MobiDBLite consensus disorder prediction 135 185 - -
Trre5g03802 737 MobiDBLite consensus disorder prediction 423 443 - -
Trre5g03802 737 MobiDBLite consensus disorder prediction 135 180 - -
Trre5g03802 737 SUPERFAMILY Chaperone J-domain 58 127 IPR036869 -
Trre5g03802 737 MobiDBLite consensus disorder prediction 426 443 - -
Trre5g03802 737 PRINTS DnaJ domain signature 103 123 IPR001623 -
Trre5g03802 737 PRINTS DnaJ domain signature 87 102 IPR001623 -
Trre5g03802 737 PRINTS DnaJ domain signature 69 87 IPR001623 -
Trre5g03802 737 MobiDBLite consensus disorder prediction 233 275 - -
Trre5g03802 737 Gene3D DnaJ domain 64 176 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g03802 Trre-Chr5 38639854 38642173 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g03802 5 230 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 32.051 1.05e-29 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g03802 - - cam:101501612 1251.5