Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g03776 ATGAATCTGTGCTGTTCTGACCATGCTGCAAGTGCAAAGGAACCTATGAAGAAATCTAAGAAAAAAGAATTATCTATGAAAGAAGAATCTTCTCCGGGTCGTCGAGATGAAAACAAATTGGTCTTTTTTGAGGATTGTTATCTTGCATTTGATCTAGAGGATCTGTTGAGAGCTTCAAGTAAGATTCTTGGAAAAGGTACTATTGGAACAACATATAAGGCTGCTTTAGAGGATGTAACCACTGTGGTTGTAAAGAGGTTGAAAGAAGTTACTGTTGGGAAAAGAGAGTTTGAACAACATATGGAAGTTTTAGGGAAAATTAAGCATGAAAATGTGGATGCATTAAGAGCTTACTATTATTCAAAAGATGAGAAACTAGTAGTATATGATTATTATCATCAAGGCAGTGTTTATTCCATCTTACATGGCAAAAGAGGGGAAAGAAGGACTAGTATAGATTGGTATAGCCGGTTAAGGATTGCGATCGGTACAGCAAGAGGCATTGCTCACATACATACTCAACAAGGAGGGAAACTAGTTCATGGAAACATAAAAGCTTCAAACATCTTCATCAACTCACAAGGATATGGTTGTGTATCTGACATAGGCTTAACAACATTGATGAGTTCGATACTTTCACCAGGTAATAGAGCAACAGGATATTGTGCGCCAGAAGTAACCGATGCACGTAAAGCAACACATTCGTCTGATGTATACAGTTTTGGTGTCCTATTACTTGAGCTTCTAACTAGGAAAACACCAATATATTCTTCGGAACGTGATCAAGCATTTCACTTGGTTAGATGGGTGAAGTGTGTGGTAAGAGAAGAATGGACTTCAGAGGTTTTTGATGTGGAGCTTTTGAGGTATTCAAATATAGAGGAAGAAATGGTGGAGATGCTACAAATAGGGATGGCTTGTGCAGCAAGAAGGCCAGATCAAAGACCAAAAATGGCTGAAGTTGTGAGAATGATAGAAGGGATTCATCTGGAAAATCGATCGCCGTCTACTGAGACTAGATCAGAAGTTTCTACTACAACTATTTATTCAACCTAA 1056 0.3816 MNLCCSDHAASAKEPMKKSKKKELSMKEESSPGRRDENKLVFFEDCYLAFDLEDLLRASSKILGKGTIGTTYKAALEDVTTVVVKRLKEVTVGKREFEQHMEVLGKIKHENVDALRAYYYSKDEKLVVYDYYHQGSVYSILHGKRGERRTSIDWYSRLRIAIGTARGIAHIHTQQGGKLVHGNIKASNIFINSQGYGCVSDIGLTTLMSSILSPGNRATGYCAPEVTDARKATHSSDVYSFGVLLLELLTRKTPIYSSERDQAFHLVRWVKCVVREEWTSEVFDVELLRYSNIEEEMVEMLQIGMACAARRPDQRPKMAEVVRMIEGIHLENRSPSTETRSEVSTTTIYST 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g03776 351 Pfam Protein tyrosine and serine/threonine kinase 60 324 IPR001245 GO:0004672|GO:0006468
Trre5g03776 351 FunFam pollen receptor-like kinase 1 25 131 - -
Trre5g03776 351 PANTHER OS05G0588300 PROTEIN 30 333 - -
Trre5g03776 351 MobiDBLite consensus disorder prediction 1 33 - -
Trre5g03776 351 ProSiteProfiles Protein kinase domain profile. 57 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre5g03776 351 MobiDBLite consensus disorder prediction 11 33 - -
Trre5g03776 351 Gene3D Transferase(Phosphotransferase) domain 1 133 349 - -
Trre5g03776 351 SUPERFAMILY Protein kinase-like (PK-like) 60 326 IPR011009 -
Trre5g03776 351 Gene3D Phosphorylase Kinase; domain 1 20 131 - -
Trre5g03776 351 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 132 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g03776 Trre-Chr5 37843302 37845537 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g03776 38 343 Receptor kinase-like Gene Family AT4G23740 64.706 4.52e-147 427
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Trre5g03776 PK_Tyr_Ser-Thr 1.4e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g03776 - - mtr:25489776 535.028