Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g03750 ATGGGGAAGGTAACAGTTCCATTTATAGGGATGATAATTGCAGAGTGTGTTCAAGTTGCTTTAATCATATTAAGCAAACAAGTTATGTCAAAAGGAATGACAAGTTTCATATTCATTTTCTATTCAAATTCAATCGCTGCTCTTGTTCTTCTTCCTTCTTCCTTTTTCATCCATAGATTTCAACTTCCTCCAATCACTTTTTCAACTCTTTCTGCTTTCTTCATACTTGGATTACTTGGTTATTTTGCGCAGGTTTTTGGATATGCTGGGATTAATTACAGCTCATCAACACTTGCTACTGCTATGCTTAATCTTGTTCCTGGTTTTACCTTCATCCTTGCTGTTCTTTTTAGAATGGAACAGTTGGATTGGAGAAGCTCTAGCAGCTTAGCTAAATCATTGGGAACAATAGTATCAATTGCTGGTGCTTTTATTGCGACTTTATACAAGGGTGTTGCAATTCTGAAGGGTCCATCACCTGCAAACTTATCTCAGCAGCCACTTTTCTCACAAGATTTTAATTGGATACTCGGAGGATTATTTCTTTCAGCTGATTGTGTGATGGCTTCAGCATTTCTTATAGTACAGGCTTCTATTCTTAAGAAATATCCAGCAGGGTTGATTGTTGTATTCTTTTATTGTTTCTTTGTTGCCATTCTCTCTGGGGTGACCTGTTTGGCTGTGGAAAGAGACATCAGTGCTTGGAGCTTGGAACCTAAGCTAAGGTTGCTATCAGTTTTATACTCGGGAATCTTTGGTTCTGCAGTTCAAGTTGGTGTTACTACTTGGTGTTTGCACCAGACAGGACCTGTTTTTGTTTCCATGTTCAAGCCCATAGGAATTGTCATATCGGTAGTTATAAGTGTTGTTTTCCTTGGCGATGCATTCTATCTTGGAAGTTTGATTGGTGCTACTGTGATTGTTATTGGGTTTTATTCCGTATTGTGGGGAAAATCCAAAGATATTGAAGCCAGAAGCTTGGAATCAAGCAGCAACCAGACCCCCCTTTTGAAGGAAAACATCAGTGAAGACATATGA 1038 0.3863 MGKVTVPFIGMIIAECVQVALIILSKQVMSKGMTSFIFIFYSNSIAALVLLPSSFFIHRFQLPPITFSTLSAFFILGLLGYFAQVFGYAGINYSSSTLATAMLNLVPGFTFILAVLFRMEQLDWRSSSSLAKSLGTIVSIAGAFIATLYKGVAILKGPSPANLSQQPLFSQDFNWILGGLFLSADCVMASAFLIVQASILKKYPAGLIVVFFYCFFVAILSGVTCLAVERDISAWSLEPKLRLLSVLYSGIFGSAVQVGVTTWCLHQTGPVFVSMFKPIGIVISVVISVVFLGDAFYLGSLIGATVIVIGFYSVLWGKSKDIEARSLESSSNQTPLLKENISEDI 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g03750 345 Pfam EamA-like transporter family 181 315 IPR000620 GO:0016020
Trre5g03750 345 Pfam EamA-like transporter family 10 145 IPR000620 GO:0016020
Trre5g03750 345 SUPERFAMILY Multidrug resistance efflux transporter EmrE 239 319 - -
Trre5g03750 345 PANTHER WAT1-RELATED PROTEIN 6 328 IPR030184 GO:0016020|GO:0022857
Trre5g03750 345 SUPERFAMILY Multidrug resistance efflux transporter EmrE 45 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g03750 Trre-Chr5 37590854 37593951 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g03750 3 333 Nodulin-like Gene Family AT3G28050 45.808 2.11e-90 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g03750 - - gmx:100804932 530.791