Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g03749 ATGGAAACTAAGATTAGGACTTCAGAATTGGTTCCATTTATAATTATGGTGATTATGGAAGGGTGCACAATAGCACTAACTATATTTGCAAAAACTTCCATAACCAATGGAATGAGTCCATTTGTGTTCATTGTTTATACTAATGCTTTGGCTACTATAATTTTGTTTCCTTCTTCCTTTTTATTAAACCACCAAAACCAAAACAGAAAGGAGAAGCCACTTTTTACTTTCTCTTTGTTTATGAGATTCTTGCTACTTGGTTTTACAGGAATAACAATGACTCAAACACTTTTATTTTTGGGTCTAAGCTATAGTTCTCCAATACTTGTATGTGCCATGAGCCACTTGATCCCAACTTTTAATTTTCTCCTCAATATGATTAACAGGAAGGTAGAGTTGAATTTGAAAAACACTAGTATCCAAGTACAAATGATTGGTATAATGGTATCAATAATGGGAGCAATAGTTGCTGAATTCTTCAAAGGGCCACTTATAAGACCCTCTTCTCACCACCTTAAACAAACTAAGCAACTTTTTATCTTTTCCTCAACACCTGAATTTTGGGTTTTTGGTGGCATTTTACTTGCTGCTGCTTCTTTTTCAGTTTCAATTGCCAACTGTATTCAGAAAGAAACTATTAAGCAATATCCAGAACCAATGAAGATGGTTTCATATTATACCTTGCTTGGGATGATCCTAAGTGCAATAGTCTCATGCATATTTGAGAGTGATGTAAATGCTTGGAAGCTAAAGCATAACATGGAGCTCATTCTCATATTTTTAACAGCGATATTTGGAGGTGTGATTCGTCCGAATATTCAAGTTTGGTTGAGTAGAATGAAGGGTCCACTTTATGTGCCACAGTTCAAGCCCTTTGGTATTGCTTTTGCCACCACTTTTGGAGTTTGCTTTTTTCCTAACAGCCTTCACTATGGAAGTGTGATAGGAGCAAGTGTAATTGGAATGGGGTATTATACAATATTGTATGGGGAATTCAAAGGAGATGAAGATGAGAAAATTTATAATGAAAGCTCAGATTCTTGGGACAAGAAGATTCCTCTTTTGCAAGAAAAGATGGAACAAGTGTAA 1089 0.3535 METKIRTSELVPFIIMVIMEGCTIALTIFAKTSITNGMSPFVFIVYTNALATIILFPSSFLLNHQNQNRKEKPLFTFSLFMRFLLLGFTGITMTQTLLFLGLSYSSPILVCAMSHLIPTFNFLLNMINRKVELNLKNTSIQVQMIGIMVSIMGAIVAEFFKGPLIRPSSHHLKQTKQLFIFSSTPEFWVFGGILLAAASFSVSIANCIQKETIKQYPEPMKMVSYYTLLGMILSAIVSCIFESDVNAWKLKHNMELILIFLTAIFGGVIRPNIQVWLSRMKGPLYVPQFKPFGIAFATTFGVCFFPNSLHYGSVIGASVIGMGYYTILYGEFKGDEDEKIYNESSDSWDKKIPLLQEKMEQV 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g03749 362 Pfam EamA-like transporter family 14 156 IPR000620 GO:0016020
Trre5g03749 362 Pfam EamA-like transporter family 191 328 IPR000620 GO:0016020
Trre5g03749 362 PANTHER WAT1-RELATED PROTEIN 11 335 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g03749 Trre-Chr5 37584509 37587046 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g03749 1 361 Nodulin-like Gene Family AT1G70260 48.267 2.13e-122 356
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g03749 - - vum:124840741 551.977