Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g03737 ATGAAGAAGTGTTGGTTTGTTGGAGTATTGATTGTGGTGAGCTTTTTGGGTACAAAAATTGGGGTTGAAGGGTACCCAATTGAGGATCTAGTTGTGAGACTACCAGGCCAACCTAAGGTTGAATTCAAGCAATATGTTGGCTATGTTGATGTTGATGTAAAACATGGGAGGAGTCTCTTCTATTATTTTGTTGAGGCTGACCACGATCCTGACAAAAAGCCCCTCACACTTTGGCTCAATGGAGGTCCGGGATGTTCTTCAATTGGAGGAGGTGCTTTTACTGAATTGGGCCCATTCTATCCTACCGGTGATGGACGTGGTCTACGAAGAAATCCAGAGTCTTGGAATAGAGCTTCCAATATCCTCTTTGTGGAGTCTCCTGCTGGAGTTGGTTGGTCATATTCAAACACAACTTCCGATTATAACACTGGTGATGCTTCCACAGCCAATGATATGCTTTTGTTCTTTCTGAAATGGTATGAAAAGTTTCCTTCATACAGATCAAGGAAGTTGCTTCTTACTGGAGAAAGCTATGCAGGACACTACATTCCTCAATTAGCCAATGCTATTCTTGATTATAATGCCCATTCAACCAATTTCAAGTTCAATTTAAAAGGACTCGCAATTGGAAACCCACTTCTGAATTTAGATCGTGATACGCAAGCAACATATGAATATTTTTGGTCACATGGAATGATTTCTGATGAAATTGACCTAACCATTAAGAACGTTTGTGATTTCGACGATTATACCGATTTTGGTTCTCATAACGTATCCAAATCATGCAACAAAGCCCTAAACGAGACTGATAAAATTGTGAGTGAGTACGTAAACAACTACGATGTGATTCTCGATGTTTGTTATCCGGCCATAGCTGAACAACAAATAATATTGAGAAAAATGGCTACAAAAATAAGTTTAAGTGTAGATGTTTGTATGGAATATGAAATGGGTTTCTACCTTAACCTCCCAGAAGTTCAAAAGGCTCTTCATGCCAATCGTACCAATCTTCCGTATGCATGGTCTATGTGTAGTAATAACACTTTAAATTACAGTGAACCTGATATCAAGATTAATATTCTTCCAATTCTTAAACGAATAGTTCAAAATCATATTCCGATATTGGTTTACAGTGGAGACCAAGATTCAGTTGTACCATTTCTAGGTTCTCGAACACTCATTCGCGAACTAGCCCATGACCTTAAATTTAAGATTACCGACCCATATAGAGTTTGGTTCCACAAAGGCCAGGTTGGAGGTTGGGTAACTGAGTATGGAAATTTGTTGACGTTTGCCACCGTAAGAGGAGCAGGTCACATGGTACCATATGCACAACCCTCTAGAGCATTACATTTATTTAGTTCCTTTGTACTTAACCAGAGACTTCCAAATACTACTCGACCTTCAATTGGAAATTGA 1419 0.3911 MKKCWFVGVLIVVSFLGTKIGVEGYPIEDLVVRLPGQPKVEFKQYVGYVDVDVKHGRSLFYYFVEADHDPDKKPLTLWLNGGPGCSSIGGGAFTELGPFYPTGDGRGLRRNPESWNRASNILFVESPAGVGWSYSNTTSDYNTGDASTANDMLLFFLKWYEKFPSYRSRKLLLTGESYAGHYIPQLANAILDYNAHSTNFKFNLKGLAIGNPLLNLDRDTQATYEYFWSHGMISDEIDLTIKNVCDFDDYTDFGSHNVSKSCNKALNETDKIVSEYVNNYDVILDVCYPAIAEQQIILRKMATKISLSVDVCMEYEMGFYLNLPEVQKALHANRTNLPYAWSMCSNNTLNYSEPDIKINILPILKRIVQNHIPILVYSGDQDSVVPFLGSRTLIRELAHDLKFKITDPYRVWFHKGQVGGWVTEYGNLLTFATVRGAGHMVPYAQPSRALHLFSSFVLNQRLPNTTRPSIGN 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g03737 472 ProSitePatterns Serine carboxypeptidases, histidine active site. 429 446 IPR033124 GO:0004185
Trre5g03737 472 Gene3D alpha/beta hydrolase 27 288 IPR029058 -
Trre5g03737 472 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 31 446 IPR001563 GO:0004185|GO:0006508
Trre5g03737 472 SUPERFAMILY alpha/beta-Hydrolases 23 466 IPR029058 -
Trre5g03737 472 Pfam Serine carboxypeptidase 36 458 IPR001563 GO:0004185|GO:0006508
Trre5g03737 472 ProSitePatterns Serine carboxypeptidases, serine active site. 173 180 IPR018202 GO:0004185
Trre5g03737 472 FunFam Carboxypeptidase 25 289 - -
Trre5g03737 472 PRINTS Carboxypeptidase C serine protease (S10) family signature 429 442 IPR001563 GO:0004185|GO:0006508
Trre5g03737 472 PRINTS Carboxypeptidase C serine protease (S10) family signature 159 184 IPR001563 GO:0004185|GO:0006508
Trre5g03737 472 PRINTS Carboxypeptidase C serine protease (S10) family signature 124 134 IPR001563 GO:0004185|GO:0006508
Trre5g03737 472 PRINTS Carboxypeptidase C serine protease (S10) family signature 111 123 IPR001563 GO:0004185|GO:0006508
Trre5g03737 472 FunFam Carboxypeptidase 360 459 - -
Trre5g03737 472 Gene3D - 360 458 - -
Trre5g03737 472 Gene3D - 312 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g03737 Trre-Chr5 37355288 37358653 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g03737 319 462 Calmodulin-binding Proteins AT2G22960 31.250 1.49e-14 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g03737 K16297 - gmx:100815723 799.66