Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g03703 ATGGTACCTCCGGGTCCAGGGCCACCAACTCCCATTGGCGGTGCTCATTCTCTCTCTCCTTCTCTATTGAGAACTAATTCAGGAATGTTAGGAGCTCAAGGGGGTCTCATGTCTTCACAGACATCTTACTCTTCGCTCGTGTCTCCTCGTACTCAGTTCAACAACATGAACATTCTAGGAAATATGTCCAATATAACTTCTATGCTGAATCAATCATTCTCAAATGGAGTTCCAAGTCATGGGCTCACTGGTCAAGGAAGTAACCAGCGTGGAGGAATTGAAACTGGAGCTGAAACAGGCCAAATTTCCGGTGTTGGAAATGGGATGAGCTTCAATAATTCTCCATCCTCATTTATACAATCAAATATGGCGAATGCGGGTTCTTCTGGTCAAATTCAGGGTCAGCAATTTTCGAACCCTTCTAGCAACCAACTATTGTCAGATCATCAGCATTCTCAACAGCTTGATCCTCACAATTTCCAACACAGCCAGCAGTCAATGCAACAGTTCCCTTCTCCTCTGAATACACAGCAGCAGCAACATTTTCAATCAATGCGAGGAGGAATAGGTGGAATGGGATCAGTGAAGTTAGAGCCCCAGGCAAACAACGACCAACTTGGACAGCAGCAGCTGCAATCAATGAGGAATCTTCCTCCAGTGAAATTGGATCAACAACAAATTCAAACAATGAGAAATCTTGCACCAGTTAAAATGGAGCCCCAGCATTGTGATCAATCGTTATTTTTGCAGCAACAACAGCAGCAGCAGCAGCAGCAACAGTTCCTCCACATGTCGAGACAGTCTTCTCAGGCTGCTGCTGCTCAGATCAATCTTTTGAACCATCACAGGCTTTTACAGTTACAACAACACCAGCAGCAACAACTCTTAAAGGCAATGCCTCAACAACGACCTCAATTACCACAACAATTTCAACAGCAGAATATGCCTATGAGGTCTCCTGTGAAACCTGCATATGAACCAGGGATGTGTGCAAGGCGGCTGACATACTACATGTATCAGCAACAACATAGACCCGAGGATAACAACATCTTGTTTTGGAGGAAGTTTGTCGCTGAATATTTTGCTCCCAATGCAAAGAAGAAATGGTGTGTTTCTATGTATGGAAGTAGCAGACAAACAACTGGAGTTTTCCCTCAGGATGGATGGCACTGTGAAATATGTAATCACAAACCTGGCCGTGGGTTTGAAGCAACTGTTGAGGTTCTTCCCAGGCTTTTCAAGATAAAGTATGAAAGTGGTACTCTGGAAGAGCTACTTTATGTTGACATGCCCCGTGAATATCATAATTCCTCGGGCCAAATTGTTCTAGATTATGCAAAAGCGATACAAGAAAGTGTTTTTGAGCAACTTCGTGTTGTTCGTGATGGTCAACTTCGAATAGTTTTCTCTCCAGACCTGAAGATATGCTCTTGGGAATTTTGTGCCCGTCGGCACGAAGAGCTCATCCCCAGAAGATTGTTAATACCTCAGGTTAGTCAGATTGGAACGGTTGCTCAGAAATACCAGTCTTTAACTCAAAATACAACACCGAATATATCTGCTCCAGAGTTACAAAACAATTGCAATATGTTTGTTACATCAGCCCGTCAATTGGCTAAAGCCCTAGAAGTTCCATTAGTTAATGATTTAGGATATACTAAGAGATACGTGCGCTGCCTACAGATATCAGAGGTGGTAAATAGCCTGAAAGACTTGATAGATCACAGCAGAGAAACAGGGACTGGACCTATGGAGAGCTTAGCCAAATTCCCTAGGAGAACTGTAAATTCATGTGGAGTTCGAAATCAAGCTCAACAGCATGAAGATCAATCAAAACAACAGCAGCAACAGCAAATGGGGGTCCACAACTCAAATGGCGATCAAAACCCAGTGCAAGCTGCTGCCATGCAAATTGGTTCCAGCAACGGTATGGTTAGTGTAAATAGTTCTGTCACCTCAGCGTCTGCATCAACAACCACAAGCACTATTGTTGGACTTCTCCATCAAAACTCTGTGAATTCTAGACAAAATTCAATGAACAATGCAAACAGTCCATATGGAGGTAGATCTGTTCAGATTCCATCCCCTGGTTCCTCCAGTACTGTGCCACAGGTCCAGCCAAGCTCATCCCCTTTTCAGTCACCGCCTACACCATCCTCATCTAATAACCCCCCACCAACACCTCATTCTACTTTAACGCCTACCAATCAAATAAATACAACAAATTCAACAGCTAATATTTCCTTGCAACAACAACATCAATATCAACCATCTCTTTCTGATGACGCTGACCCAAGTGATGCTCAAAACTCTGTCAAAAAAATAATACACGAGATGATGATGTCCTCCCAGATGAATGGTACAGGTGGAATGACAGGTGTTGGTTCTCTAGGAAATGATTTGAAGAATGTAAATGGCATTCTGCCAATGAGTGCAAATACAGGGCTCAACAATAGTAACAGCACACTTAATAATACAGGTGTTGGTAGTTATGGAACAATGGGGTTCGGTCAATCCACTATGCCTAATGGAATCAGAGCTGCTATGGTAAACCATTCAGTCATGAATGGAAGGGGAGGAATGTCAGTCATGAATGGAAGGGGAGGAATGTCAATGTCATCTATTGCTCGGGATCAAGCTATGAATCATCAACAGGATCTTTCAAACCAACTACTTAGTGGTCTAGGAGCAGTAAACGGTTTTAGTAATCTTCAATTTGATTGA 2724 0.4299 MVPPGPGPPTPIGGAHSLSPSLLRTNSGMLGAQGGLMSSQTSYSSLVSPRTQFNNMNILGNMSNITSMLNQSFSNGVPSHGLTGQGSNQRGGIETGAETGQISGVGNGMSFNNSPSSFIQSNMANAGSSGQIQGQQFSNPSSNQLLSDHQHSQQLDPHNFQHSQQSMQQFPSPLNTQQQQHFQSMRGGIGGMGSVKLEPQANNDQLGQQQLQSMRNLPPVKLDQQQIQTMRNLAPVKMEPQHCDQSLFLQQQQQQQQQQQFLHMSRQSSQAAAAQINLLNHHRLLQLQQHQQQQLLKAMPQQRPQLPQQFQQQNMPMRSPVKPAYEPGMCARRLTYYMYQQQHRPEDNNILFWRKFVAEYFAPNAKKKWCVSMYGSSRQTTGVFPQDGWHCEICNHKPGRGFEATVEVLPRLFKIKYESGTLEELLYVDMPREYHNSSGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQIGTVAQKYQSLTQNTTPNISAPELQNNCNMFVTSARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSLKDLIDHSRETGTGPMESLAKFPRRTVNSCGVRNQAQQHEDQSKQQQQQQMGVHNSNGDQNPVQAAAMQIGSSNGMVSVNSSVTSASASTTTSTIVGLLHQNSVNSRQNSMNNANSPYGGRSVQIPSPGSSSTVPQVQPSSSPFQSPPTPSSSNNPPPTPHSTLTPTNQINTTNSTANISLQQQHQYQPSLSDDADPSDAQNSVKKIIHEMMMSSQMNGTGGMTGVGSLGNDLKNVNGILPMSANTGLNNSNSTLNNTGVGSYGTMGFGQSTMPNGIRAAMVNHSVMNGRGGMSVMNGRGGMSMSSIARDQAMNHQQDLSNQLLSGLGAVNGFSNLQFD 907
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g03703 907 MobiDBLite consensus disorder prediction 670 740 - -
Trre5g03703 907 MobiDBLite consensus disorder prediction 670 708 - -
Trre5g03703 907 MobiDBLite consensus disorder prediction 80 199 - -
Trre5g03703 907 MobiDBLite consensus disorder prediction 19 34 - -
Trre5g03703 907 MobiDBLite consensus disorder prediction 709 731 - -
Trre5g03703 907 PANTHER LIM DOMAIN-BINDING PROTEIN 43 901 IPR029005 -
Trre5g03703 907 MobiDBLite consensus disorder prediction 1 34 - -
Trre5g03703 907 Pfam LIM-domain binding protein 333 587 IPR029005 -
Trre5g03703 907 MobiDBLite consensus disorder prediction 750 769 - -
Trre5g03703 907 MobiDBLite consensus disorder prediction 599 629 - -
Trre5g03703 907 MobiDBLite consensus disorder prediction 80 185 - -
Trre5g03703 907 MobiDBLite consensus disorder prediction 750 766 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g03703 Trre-Chr5 36653722 36659317 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g03703 8 907 C2H2 Transcription Factor Family AT1G43850 55.839 0.0 704
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g03703 - - gmx:100787573 1233.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g03703 5 36653722 36659317 Trre5g03703 5 36653722 36659317 ECH