Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g03702 ATGGTACCTCCGGGTCCAGGGCCACCAACTCCCATTGGCGGTGCTCATTCTCTCTCTCCTTCTCTATTGAGAACTAATTCAGGAATGTTAGGAGCTCAAGGGGGTCTCATGTCTTCACAGACATCTTACTCTTCGCTCGTGTCTCCTCGTACTCAGTTCAACAACATGAACATTCTAGGAAATATGTCCAATATAACTTCTATGCTGAATCAATCATTCTCAAATGGAGTTCCAAGTCATGGGCTCACTGGTCAAGGAAGTAACCAGCGTGGAGGAATTGAAACTGGAGCTGAAACAGGCCAAATTTCCGGTGTTGGAAATGGGATGAGCTTCAATAATTCTCCATCCTCATTTATACAATCAAATATGGCGAATGCGGGTTCTTCTGGTCAAATTCAGGGTCAGCAATTTTCGAACCCTTCTAGCAACCAACTATTGTCAGATCATCAGCATTCTCAACAGCTTGATCCTCACAATTTCCAACACAGCCAGCAGTCAATGCAACAGTTCCCTTCTCCTCTGAATACACAGCAGCAGCAACATTTTCAATCAATGCGAGGAGGAATAGGTGGAATGGGATCAGTGAAGTTAGAGCCCCAGGCAAACAACGACCAACTTGGACAGCAGCAGCTGCAATCAATGAGGAATCTTCCTCCAGTGAAATTGGATCAACAACAAATTCAAACAATGAGAAATCTTGCACCAGTTAAAATGGAGCCCCAGCATTGTGATCAATCGTTATTTTTGCAGCAACAACAGCAGCAGCAGCAGCAGCAACAGTTCCTCCACATGTCGAGACAGTCTTCTCAGGCTGCTGCTGCTCAGATCAATCTTTTGAACCATCACAGGCTTTTACAGTTACAACAACACCAGCAGCAACAACTCTTAAAGGCAATGCCTCAACAACGACCTCAATTACCACAACAATTTCAACAGCAGAATATGCCTATGAGGTCTCCTGTGAAACCTGCATATGAACCAGGGATGTGTGCAAGGCGGCTGACATACTACATGTATCAGCAACAACATAGACCCGAGGATAACAACATCTTGTTTTGGAGGAAGTTTGTCGCTGAATATTTTGCTCCCAATGCAAAGAAGAAATGGTGTGTTTCTATGTATGGAAGTAGCAGACAAACAACTGGAGTTTTCCCTCAGGATGGATGGCACTGTGAAATATGTAATCACAAACCTGGCCGTGGGTTTGAAGCAACTGTTGAGGTTCTTCCCAGGCTTTTCAAGATAAAGTATGAAAGTGGTACTCTGGAAGAGCTACTTTATGTTGACATGCCCCGTGAATATCATAATTCCTCGGGCCAAATTGTTCTAGATTATGCAAAAGCGATACAAGAAAGTGTTTTTGAGCAACTTCGTGTTGTTCGTGATGGTCAACTTCGAATAGTTTTCTCTCCAGACCTGAAGATATGCTCTTGGGAATTTTGTGCCCGTCGGCACGAAGAGCTCATCCCCAGAAGATTGTTAATACCTCAGGTTAGTCAGATTGGAACGGTTGCTCAGAAATACCAGTCTTTAACTCAAAATACAACACCGAATATATCTGCTCCAGAGTTACAAAACAATTGCAATATGTTTGTTACATCAGCCCGTCAATTGGCTAAAGCCCTAGAAGTTCCATTAGTTAATGATTTAGGATATACTAAGAGATACGTGCGCTGCCTACAGATATCAGAGGTGGTAAATAGCCTGAAAGACTTGATAGATCACAGCAGAGAAACAGGGACTGGACCTATGGAGAGCTTAGCCAAATTCCCTAGGAGAACTGTAAATTCATGTGGAGTTCGAAATCAAGCTCAACAGCATGAAGATCAATCAAAACAACAGCAGCAACAGCAAATGGGGGTCCACAACTCAAATGGCGATCAAAACCCAGTGCAAGCTGCTGCCATGCAAATTGGTTCCAGCAACGGTATGGTTAGTGTAAATAGTTCTGTCACCTCAGCGTCTGCATCAACAACCACAAGCACTATTGTTGGACTTCTCCATCAAAACTCTGTGAATTCTAGACAAAATTCAATGAACAATGCAAACAGTCCATATGGAGGTAGATCTGTTCAGATTCCATCCCCTGGTTCCTCCAGTACTGTGCCACAGGTCCAGCCAAGCTCATCCCCTTTTCAGTCACCGCCTACACCATCCTCATCTAATAACCCCCCACCAACACCTCATTCTACTTTAACGCCTACCAATCAAATAAATACAACAAATTCAACAGCTAATATTTCCTTGCAACAACAACATCAATATCAACCATCTCTTTCTGATGACGCTGACCCAAGTGATGCTCAAAACTCTGTCAAAAAAATAATACACGAGATGATGATGTCCTCCCAGATGAATGGTACAGGTGGAATGACAGGTGTTGGTTCTCTAGGAAATGATTTGAAGAATGTAAATGGCATTCTGCCAATGAGTGCAAATACAGGGCTCAACAATAGTAACAGCACACTTAATAATACAGGTGTTGGTAGTTATGGAACAATGGGGTTCGGTCAATCCACTATGCCTAATGGAATCAGAGCTGCTATGGTAAACCATTCAGTCATGAATGGAAGGGGAGGAATGTCAGTCATGAATGGAAGGGGAGGAATGTCAATGTCATCTATTGCTCGGGATCAAGCTATGAATCATCAACAGGATCTTTCAAACCAACTACTTAGTGATGGTATGCATGTTGTGGTTCTTGACAGCTGCTTGTGCTGCATGATGAGCAATGTTAGAATTGCATTCGTCGGCAGAACACAATTGGGTAGTGATAGGGTGTAG 2784 0.4321 MVPPGPGPPTPIGGAHSLSPSLLRTNSGMLGAQGGLMSSQTSYSSLVSPRTQFNNMNILGNMSNITSMLNQSFSNGVPSHGLTGQGSNQRGGIETGAETGQISGVGNGMSFNNSPSSFIQSNMANAGSSGQIQGQQFSNPSSNQLLSDHQHSQQLDPHNFQHSQQSMQQFPSPLNTQQQQHFQSMRGGIGGMGSVKLEPQANNDQLGQQQLQSMRNLPPVKLDQQQIQTMRNLAPVKMEPQHCDQSLFLQQQQQQQQQQQFLHMSRQSSQAAAAQINLLNHHRLLQLQQHQQQQLLKAMPQQRPQLPQQFQQQNMPMRSPVKPAYEPGMCARRLTYYMYQQQHRPEDNNILFWRKFVAEYFAPNAKKKWCVSMYGSSRQTTGVFPQDGWHCEICNHKPGRGFEATVEVLPRLFKIKYESGTLEELLYVDMPREYHNSSGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQIGTVAQKYQSLTQNTTPNISAPELQNNCNMFVTSARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSLKDLIDHSRETGTGPMESLAKFPRRTVNSCGVRNQAQQHEDQSKQQQQQQMGVHNSNGDQNPVQAAAMQIGSSNGMVSVNSSVTSASASTTTSTIVGLLHQNSVNSRQNSMNNANSPYGGRSVQIPSPGSSSTVPQVQPSSSPFQSPPTPSSSNNPPPTPHSTLTPTNQINTTNSTANISLQQQHQYQPSLSDDADPSDAQNSVKKIIHEMMMSSQMNGTGGMTGVGSLGNDLKNVNGILPMSANTGLNNSNSTLNNTGVGSYGTMGFGQSTMPNGIRAAMVNHSVMNGRGGMSVMNGRGGMSMSSIARDQAMNHQQDLSNQLLSDGMHVVVLDSCLCCMMSNVRIAFVGRTQLGSDRV 927
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g03702 927 MobiDBLite consensus disorder prediction 670 740 - -
Trre5g03702 927 MobiDBLite consensus disorder prediction 670 708 - -
Trre5g03702 927 MobiDBLite consensus disorder prediction 80 199 - -
Trre5g03702 927 Pfam LIM-domain binding protein 333 587 IPR029005 -
Trre5g03702 927 MobiDBLite consensus disorder prediction 19 34 - -
Trre5g03702 927 MobiDBLite consensus disorder prediction 709 731 - -
Trre5g03702 927 MobiDBLite consensus disorder prediction 1 34 - -
Trre5g03702 927 MobiDBLite consensus disorder prediction 750 769 - -
Trre5g03702 927 MobiDBLite consensus disorder prediction 750 766 - -
Trre5g03702 927 MobiDBLite consensus disorder prediction 599 629 - -
Trre5g03702 927 MobiDBLite consensus disorder prediction 80 185 - -
Trre5g03702 927 PANTHER LIM DOMAIN-BINDING PROTEIN 43 893 IPR029005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g03702 Trre-Chr5 36653589 36659317 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g03702 8 892 C2H2 Transcription Factor Family AT1G43850 55.987 0.0 694
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g03702 - - gmx:100787573 1207.59