Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g03695 ATGTCTCAGGGAAGAGGCAGTGCATCTATGAACATGGCCACTGTGATGATTTCACTGCTCTGCCTTTTGGTTCTTGCTCAAAGTGCTAATGCAGCAACCTACACCGTTGGAGGACCTGGAGGATGGACCTTCAACACTGATACTTGGTCCAATGGAAAAAAGTTTAGAGCTGGTGATGTGCTAATCTTCAACTATGACTCGACGACACACAATGTGGTTGCCGTCGACAAAAGCGGACACAACAGCTGCAAGGCGACGGGAGGTGCTAAAGTGTTCAGTTCAGGGAAAGACCAAATCAGGCTAGCAAGAGGACAGAACTTTTTAATATGCAGCGTTCCTGGTCACTGCCAATCTGGGATGAAGGTTTCCATCAATGCAGTCTAG 384 0.4766 MSQGRGSASMNMATVMISLLCLLVLAQSANAATYTVGGPGGWTFNTDTWSNGKKFRAGDVLIFNYDSTTHNVVAVDKSGHNSCKATGGAKVFSSGKDQIRLARGQNFLICSVPGHCQSGMKVSINAV 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g03695 127 Gene3D - 30 127 IPR008972 -
Trre5g03695 127 ProSiteProfiles Phytocyanin domain profile. 32 127 IPR003245 GO:0009055
Trre5g03695 127 CDD Plantacyanin 32 126 IPR041844 -
Trre5g03695 127 Pfam Plastocyanin-like domain 42 120 IPR003245 GO:0009055
Trre5g03695 127 FunFam basic blue protein-like 32 126 - -
Trre5g03695 127 SUPERFAMILY Cupredoxins 32 126 IPR008972 -
Trre5g03695 127 PANTHER BLUE COPPER PROTEIN 27 125 IPR039391 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g03695 Trre-Chr5 36463087 36464170 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g03695 1 127 Phytocyanin Superfamily AT1G17800 37.956 3.79e-27 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g03695 - - gmx:100788635 214.542