Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g03664 ATGAATAGATCAGACTTACAACAATTTGCAGCATCATCTTCATCTCATTTTCGTAACCGTTTTCCAAAATCATTCTCTCTTCGTAAGAAAGTACCATGGTGGTACCAAATACTTCATCCACGTTCAAAGTTCATTGCACAATGGAACCTTACATTCCTCTATGCATGCCTATTTGCTCTTTTTTTAGATCCTCTTTATTTCTATATTCCGATTACCGGAGACAAAGCGTGTATGCAAACGGATTTGGTTCTCGGTGTGGTTGTCACGTTCTTGCGCACCGTGGCTGATCTCTTCTTCCTCTTTCATGTGATTCTTAAGTTCCGTACCGCGTTCAATTCTCCTACCTCTCATGTTTATGGTCGGAAAGAACTTATTAGTGATCCGAGTGAGATAGCCCGTAGATATCTCAAGCATGATTTTGTCATTGATCTTCTTGCCACGCTTCCTTTACCTCAGATCGTTATTTGGTTTATAGTTCCAGCGACAAAAAATTCAACGGCAGCTCATGTAAACCACACACTGTCGCTAATCGTTCTCATTCAGTACATTCCTAGATTGTTTCAGCTTTTTCCTTTACAACGCCGAATCGTGAAGACTAGCGGGCTTATAGCAAAAACTGCTTTGGCAGGAGCAATATACAATCTCGGTTTCTACATGCTCGCGAGCCATGTTTTAGGAGCAACATGGTATGTGTCTTCTATTCAAAGACAATATGAGTGTTGGAGAATAATGTGCAGGAAGGAAATGAATAGAACACATTCTCCTTCTTGCAATCCTTCTTTTCTTGATTGTACTTCTCTTTCTAACCGTGAAAGACAAGTTTGGTTTCGACGCACTCGAGTCCTAACTAATTGTGATGCACTCAATGTTAAAAACCACTTTCAATTTGGAATGTTTGCTGATGCTTTCACTGATCATGTTTCTTCCTCAAAATTCATACAAAAATATTTCTATTGCCTCTGGTGGGGTTTGAAAAATCTAAGTTCCTATGGACAAAATCTTCATACTAGTACTTATAGTGTTGAAACATTATTTTCAAGTTTCATTTGCATAGCAGGACTTATTCTGTTTGCACATCTCATTGGTAACATGCAGAATTATCTGCAATCTTCGACCGCAAGACTCGAAGAGTGGAGACTTAAACAAAAAGATACAGAAGAATGGATGAATCATCGTCAACTTCCACCAGAACTGCAAGAGCGCGTTCGTCGCTTTGTTCAGTACAAATGGCTTGCCACTAGAGGTGTTGACGAAGAAGCCATTTTGAAATCCTTGCCTGTTGATCTTCGCCGCCAGATTCAAAGACATCTCTGTCTTGATATTGTTCGCCGGGTACCTTTTTTCGGGCAAATGGATGATCAACTTCTAGATGCTATATGCGAACGTCTAGTTTCATCGTTGAACACAAAAGACTCGTATATAGTTAGAGAAGGTGATCCAGTGAGAGAGATGCTTTTTATTATCAGAGGAAGTGTAGAGAGTTCTACAACAGATGGCGGTAGATCAGGATTCTTCAATTCAATCACACTAAAACCGGGCGATTTTTGTGGCGAAGAATTGCTAACATGGGCTTTGATGCCAGCATCTAGTCTTAACCTTCCATCTTCTACAAGAACTGTAAAATCAATAACTGAAGTTGAAGCATTTGCACTTAGAGCAGAAGATCTCAAATTTGTGTCGAGCCAATTTAAGCGTCTTCATAGTAAGAAACTGCAACATGCTTTCAGATACTATTCTCATCAATGGAGAGCTTGGGGGGCTTCTTTTATACAAGCGGCGTGGAGGCGTCACCGTAAGCGACAATTGGCAATGGAGTTGATGGAAAAAGAGAACTTGTATTATGAAAATGTGATGGAGCTAGAGGATTATGAAGAGAGTGGTGCAGGAGAAAGTTCCATGGGAATGGAGGATAGTGCTAGCCAGGGACAAAATTTTGGGGCTACATTTTTGGCTTCAAAATTTGCTGCTAACACTAGGAAAGGGGCAGTTAAAAAGGTTACAATGATACCTGATAGTAGCAGTTTAAAGATGCCTAAGATGTTTAAGCCAACAATGCCTGATTTCTCAACATTTCAAGAAGATTAA 2085 0.4 MNRSDLQQFAASSSSHFRNRFPKSFSLRKKVPWWYQILHPRSKFIAQWNLTFLYACLFALFLDPLYFYIPITGDKACMQTDLVLGVVVTFLRTVADLFFLFHVILKFRTAFNSPTSHVYGRKELISDPSEIARRYLKHDFVIDLLATLPLPQIVIWFIVPATKNSTAAHVNHTLSLIVLIQYIPRLFQLFPLQRRIVKTSGLIAKTALAGAIYNLGFYMLASHVLGATWYVSSIQRQYECWRIMCRKEMNRTHSPSCNPSFLDCTSLSNRERQVWFRRTRVLTNCDALNVKNHFQFGMFADAFTDHVSSSKFIQKYFYCLWWGLKNLSSYGQNLHTSTYSVETLFSSFICIAGLILFAHLIGNMQNYLQSSTARLEEWRLKQKDTEEWMNHRQLPPELQERVRRFVQYKWLATRGVDEEAILKSLPVDLRRQIQRHLCLDIVRRVPFFGQMDDQLLDAICERLVSSLNTKDSYIVREGDPVREMLFIIRGSVESSTTDGGRSGFFNSITLKPGDFCGEELLTWALMPASSLNLPSSTRTVKSITEVEAFALRAEDLKFVSSQFKRLHSKKLQHAFRYYSHQWRAWGASFIQAAWRRHRKRQLAMELMEKENLYYENVMELEDYEESGAGESSMGMEDSASQGQNFGATFLASKFAANTRKGAVKKVTMIPDSSSLKMPKMFKPTMPDFSTFQED 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g03664 694 FunFam Cyclic nucleotide-gated ion channel 1 374 438 - -
Trre5g03664 694 Gene3D Helix hairpin bin 373 438 - -
Trre5g03664 694 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 22 688 - -
Trre5g03664 694 SMART cnmp_10 447 578 IPR000595 -
Trre5g03664 694 CDD CAP_ED 447 578 IPR000595 -
Trre5g03664 694 ProSiteProfiles cAMP/cGMP binding motif profile. 447 521 IPR000595 -
Trre5g03664 694 Gene3D - 75 371 - -
Trre5g03664 694 FunFam Cyclic nucleotide-gated ion channel 1 445 563 - -
Trre5g03664 694 SUPERFAMILY Voltage-gated potassium channels 40 369 - -
Trre5g03664 694 Gene3D Jelly Rolls 445 565 IPR014710 -
Trre5g03664 694 Pfam Cyclic nucleotide-binding domain 470 557 IPR000595 -
Trre5g03664 694 SUPERFAMILY cAMP-binding domain-like 376 572 IPR018490 -
Trre5g03664 694 Pfam Ion transport protein 48 374 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g03664 Trre-Chr5 35700634 35703827 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g03664 13 688 Ion Channels AT3G48010 64.613 0.0 912
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g03664 K05391 - gmx:100783672 1201.04