Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g03593 ATGCAGTTGTATCATCATCCATTTGATATGGACAGCCAGAAAGTGAGACTTGCATTGGAAGAGAAAGGCATTGATTATACATCTTTCCATGTCAATCCCGTAACTGGCAAGAACTTTGATTCCACATTTTTCCAGATGAATCCCAGCGGAAGCCTTCCTGTTTTCCAGAACGGCTCTCACATCATTTACAAGACTATTGATATAATTCAGTACATAGAAAGAATTGCTGTAGTCTCCGCAGGATATGAGGATATCAGTAGCAGTAGGAGTGAAGTGATTGCATGGATGAAGAAGATACAAGAGTGGGATCCTAAATATTTTTCCCTTTCCCATATACCAGAAAAATACCGAGTTTATGTTTCCAAGTTCATAAGGCGGGTGGTGATTGCTCGTATGTCAGATGCCCCTGAATTAGCAGGTGCATACCATAGGAAGTTAAGAGAAGCCTATCAAACTGAAGAAAAGTTGAAAGACCCTGATGTTTTGAGAAGGACCAGGGAGCATTTGGGTACACTGCTTGACGAAGCCGAGAGACAACTGAGTGAAACACCTTATTTGGCAGGCGAAGAGTTTACCATGGCCGATGTGATGCTTATTCCGATTTTGGTTCGTTTAAAACTCTTGGATTTAGAGAATGAGTACATAACTGTGAGGCCAAACATTGCCGAGTATTGGGTTTTGATTCAGCAGAGGCCTAGTTATAGAAAGGTGATTGGTAAGCATTTTGATGGTTGGAGAAAGCACAAAACATTGTTCAAAACTTGGTGCTTTGTTCGTATTAGAAGTTTGCTTAACCGGTACTAG 804 0.4104 MQLYHHPFDMDSQKVRLALEEKGIDYTSFHVNPVTGKNFDSTFFQMNPSGSLPVFQNGSHIIYKTIDIIQYIERIAVVSAGYEDISSSRSEVIAWMKKIQEWDPKYFSLSHIPEKYRVYVSKFIRRVVIARMSDAPELAGAYHRKLREAYQTEEKLKDPDVLRRTREHLGTLLDEAERQLSETPYLAGEEFTMADVMLIPILVRLKLLDLENEYITVRPNIAEYWVLIQQRPSYRKVIGKHFDGWRKHKTLFKTWCFVRIRSLLNRY 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g03593 267 Gene3D - 115 238 - -
Trre5g03593 267 CDD GST_N_family 1 73 - -
Trre5g03593 267 SUPERFAMILY GST C-terminal domain-like 139 240 IPR036282 -
Trre5g03593 267 Gene3D Glutaredoxin 1 75 - -
Trre5g03593 267 SUPERFAMILY Thioredoxin-like 1 74 IPR036249 -
Trre5g03593 267 PANTHER GLUTATHIONE S-TRANSFERASE TCHQD 1 267 IPR044617 GO:0004364
Trre5g03593 267 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 80 IPR004045 -
Trre5g03593 267 SFLD Glutathione Transferase (cytosolic) 1 230 IPR040079 -
Trre5g03593 267 Pfam Glutathione S-transferase, C-terminal domain 161 224 - -
Trre5g03593 267 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 252 IPR010987 -
Trre5g03593 267 CDD GST_C_family 147 225 - -
Trre5g03593 267 SFLD Main (cytGST) 1 230 - -
Trre5g03593 267 Pfam Glutathione S-transferase, N-terminal domain 1 74 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g03593 Trre-Chr5 34337993 34339178 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g03593 1 267 Glutathione S-transferase Gene Family AT1G77290 67.041 4.63e-139 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g03593 K22077 - gmx:100792543 467.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g03593 5 34337993 34339178 Trre5g03593 5 34337993 34339178 ECH