Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g03587 ATGCATGAATACATCAGTCCCTCCACCACGTTGATTGATGTTCTAGACAGATACCAGAGAGCATCTGGAAAAACTCTTTGGGATGCTAAGCATGAGAACCTTAGCAATGAAATTGATAGAATCAAAAAGGAGAATGACAGCATGCAGATTGAGCTCAGGCACTTGAAGGGGGAGGATATTACCTCACTGAATTACAAAGAGCTTATGACCCTTGAGGAAGCCCTTGAAAATGGACTTACGGGTGTCCGTGACAAAAAGAATGAAGTGCATAGGATGATCAAGAGAAATGGCAAGATTTTGGAGGATGAAAATAAGGAACTCAATTTCCTTCTTCAACATATGGCACTGGAAGGCGTGGGAAACATGCATGGACAATGGATTTAA 384 0.4167 MHEYISPSTTLIDVLDRYQRASGKTLWDAKHENLSNEIDRIKKENDSMQIELRHLKGEDITSLNYKELMTLEEALENGLTGVRDKKNEVHRMIKRNGKILEDENKELNFLLQHMALEGVGNMHGQWI 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g03587 127 Coils Coil 24 58 - -
Trre5g03587 127 Pfam K-box region 28 108 IPR002487 GO:0003700|GO:0005634|GO:0006355
Trre5g03587 127 ProSiteProfiles K-box domain profile. 31 117 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g03587 Trre-Chr5 34136743 34139478 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g03587 1 93 MADS-box Gene Family AT5G20240 65.591 1.40e-37 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g03587 K09264 - gmx:100795861 237.269