Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g03578 ATGGAGAAATATAGTGCTTATTGCAGATTAATTTTATGCTGTAATAGTTCTTCAAGAATCGCAGAAGCCATCCGCTATCGTTGTCATAATGTACGAATAAATGCACCAAGTGAAGAACAGATTGTTGAAGTCTTTTTCAGTTCATTGCCGAGAAATCAAATCGGAATTGGAGGAGGGCCATATTATCATTTGAGACTTGTAGTGTCCAACAGTCCAAATGCAATAGAATCTGTTGGACCAGGAGCTGCAAATTATGTGACTGAGATGTCAATCATTGTCCTAAAGAATGCTCCTTTTAATGTCGAAAAGTGGAAAAACATACCAGAAGATATATTTAACAAGATAGTTTCTAAAGTTTTGGATGCTTTTGACATTGATAATACAACACATAATAGAGAAGTTATTCTTTATACTGCTAAAAGACTATATCGAAATCATAGATATTATTTTTCAAGTCCTAACTATAAGGTAATCACAAAGATTGAAGAGAGTCAAAGACAACTTGGAGAAAAAGTGGACAAACAAGTTGAAGCAAAAGTGGCAACTATGCTTCGTCAAATGCTGAATATTCCAGGTGGAGAATCTTCTAGTGCACTGGATAGAGTCAGCTGA 612 0.3513 MEKYSAYCRLILCCNSSSRIAEAIRYRCHNVRINAPSEEQIVEVFFSSLPRNQIGIGGGPYYHLRLVVSNSPNAIESVGPGAANYVTEMSIIVLKNAPFNVEKWKNIPEDIFNKIVSKVLDAFDIDNTTHNREVILYTAKRLYRNHRYYFSSPNYKVITKIEESQRQLGEKVDKQVEAKVATMLRQMLNIPGGESSSALDRVS 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g03578 203 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 58 IPR027417 -
Trre5g03578 203 Gene3D - 1 36 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g03578 Trre-Chr5 33970279 33972161 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g03578 1 45 Core DNA Replication Machinery Family AT5G27740 73.333 8.06e-17 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g03578 K10756 - tpra:123905329 117.857