Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g03498 ATGTTTTCTTGTCAAGTTGAAACTGGTTCTGATTCTGTCTTTGTTGGTGTTTATGATGGACATGGTGGTCCTGATGCTTCTCGGTTTGTTAATAATCATCTCTTTAATCATCTCATCTGGATTGCAAAAGAAAATGATTCTATCTCTGAAGATATAATAAGGAATGCTGTTACTGCTACGGAGGATGGATTTATGACTCTTGTTCGAAGGAGCTTCGGAATAAAGCCACTGATAGCAGCAATGGGTTCTTGTGTTCTTGTTGGTGTTATTTGGAAAGGGACATTATATATTGCTAATCTTGGAGACTCTCGAGCTGTCATCGGTTCAATTGGTCGATCTAACAAGATCGTTGCTAAACAGTTGACCAAAGAGCACAATGCCTGCAAAGCTGATATCAGAACAGAACTTAGGTCTTTGCATCCAGAAGATTCACATATTGTTGTTCTGAAACATGGAACTTGGCGCGTTAAAGGCATTATCCAGGGAATTGCAAGAAGACTTCTTCAGTCTGCTTTGAATGAGGCGGCAAGGAAAAGCGAAGTGAGTTATGAAGATCTGATGAAGGTTGAAAAGGGGATTAGGCGATCTTTCCACGATGATATCACAATTGTTGTTATCTTCATCGACCACGAGTTGCAAAATCAGAATGTTAATGTTCCCGAGTTATCCATAAAAGGTTTTGTCGACACAGTTGGACCATCAAAATTTAGTAGTTTCCAAGAAATGCAATGA 732 0.3934 MFSCQVETGSDSVFVGVYDGHGGPDASRFVNNHLFNHLIWIAKENDSISEDIIRNAVTATEDGFMTLVRRSFGIKPLIAAMGSCVLVGVIWKGTLYIANLGDSRAVIGSIGRSNKIVAKQLTKEHNACKADIRTELRSLHPEDSHIVVLKHGTWRVKGIIQGIARRLLQSALNEAARKSEVSYEDLMKVEKGIRRSFHDDITIVVIFIDHELQNQNVNVPELSIKGFVDTVGPSKFSSFQEMQ 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g03498 243 PANTHER PROTEIN PHOSPHATASE 8 161 IPR015655 GO:0004722|GO:0006470
Trre5g03498 243 Pfam Protein phosphatase 2C 10 129 IPR001932 -
Trre5g03498 243 ProSiteProfiles PPM-type phosphatase domain profile. 1 208 IPR001932 -
Trre5g03498 243 SMART PP2C_4 1 206 IPR001932 -
Trre5g03498 243 SUPERFAMILY PP2C-like 9 209 IPR036457 -
Trre5g03498 243 ProSitePatterns PPM-type phosphatase domain signature. 14 22 IPR000222 GO:0043169
Trre5g03498 243 Gene3D - 162 219 IPR036457 -
Trre5g03498 243 Gene3D - 1 161 IPR036457 -
Trre5g03498 243 CDD PP2Cc 14 208 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g03498 Trre-Chr5 32411340 32414176 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g03498 137 239 PP2C-type Phosphatase Gene Family AT5G06750 50.435 1.62e-26 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g03498 K01102 - gmx:100813740 266.159