Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g03467 ATGGCAGAGCGTGTGTTACTCACTCCTTCACTAACTTTACCATCTCGACCTTCACCAACCGCAACAATGGCTACTATTAGTGGCGGCGCCGCCGTTCGCATCATACCTTCCGCTACCAGAGCCACCGTCTCACTCTCCTCTTCTTCCCGTTCCTTTTTCTCATTTCCATCCTCTTCAAATTCCGTTTCCTCGCTCAACTGCTTGCGCTCCTCTCCTCGCATTTCTCATCTATTTCTTGACCAGCGAAGATCAGAAGTTCGTGTTTCGAGTGGACGATTTGGAACGGTTTCTGCTCCGAAGGCGTTCGCGTCTGATCCTGATCAGTTGAAGAGTGCTAGAGAAGATATAAAGGAGCTTCTCAAGACTAAGTTCTGTCATCCTCTTTTGATTCGTTTGGGTTGGCATGATGCTGGTACTTATAATAAGAATATTGAGGAATTTCCACAAAGAGGCGGTGCCAATGGTAGCTTAAGATTTGAAGCTGAGTTGAAACATGGAGCCAATGCTGGACTTGTAAATGCATTGAAACTTCTCCAGCCAATCAAAGACAAATATTCAGGCGTGACATATGCTGACTTATTTCAGTTAGCTGGTGCTACAGCTGTGGAGGAAGCTGGAGGCCCGAAAATTCCCATGAAATATGGAAGAGTAGATGTCACTGGACCTGAACAATGCCCAGAAGAAGGGAGACTTCCTGATGCAGGTCCCCCTTCACCTGCTGGTCATTTGCGCAAAGTTTTCTACCGAATGGGGTTGAATGACAAGGAAATAGTTGCATTATCTGGTGCGCACACACTGGGGCGGTCTAGACCAGACCGTAGTGGCTGGGGCAAACCTGAGACTAAATACACGAAAGATGGGCCTGGAGCACCTGGGGGACAATCCTGGACTGCACAATGGTTAAAATTTGACAACTCTTACTTCAAGGACATCAAAGAAAAAAAGGATGAAGATTTATTGGTCTTGCCAACTGATGCTGCTCTTTTTGACGATCCTTCCTTCAAGGTATATGCTGAGAAATATGTTGAAGATCAAGAAGCATTCTTTAAAGATTATGCTGAAGCACATGCCAAACTCAGCAACCTTGGAGCCAAATTTGATCCTCCAGAGGGCATTGTGATAGATGGCTCTCCAAATGCAGTGGGAGAGAAGTTTGTAGCAGCCAAGTACTCCTCTGGAAAGAAAGAGCTGTCTGATGCTATGAGGCAGAAGATACGGGCTGAATATGAGGCGGTTGGCGGAAGCCCAGAGAAGGCTCTAAAGTCAAACTATTTTCTAAACATCATCATTGTTATTGCTGTTTTGGCTATTTTGACATCCCTGCTTGGAAACTAA 1335 0.4569 MAERVLLTPSLTLPSRPSPTATMATISGGAAVRIIPSATRATVSLSSSSRSFFSFPSSSNSVSSLNCLRSSPRISHLFLDQRRSEVRVSSGRFGTVSAPKAFASDPDQLKSAREDIKELLKTKFCHPLLIRLGWHDAGTYNKNIEEFPQRGGANGSLRFEAELKHGANAGLVNALKLLQPIKDKYSGVTYADLFQLAGATAVEEAGGPKIPMKYGRVDVTGPEQCPEEGRLPDAGPPSPAGHLRKVFYRMGLNDKEIVALSGAHTLGRSRPDRSGWGKPETKYTKDGPGAPGGQSWTAQWLKFDNSYFKDIKEKKDEDLLVLPTDAALFDDPSFKVYAEKYVEDQEAFFKDYAEAHAKLSNLGAKFDPPEGIVIDGSPNAVGEKFVAAKYSSGKKELSDAMRQKIRAEYEAVGGSPEKALKSNYFLNIIIVIAVLAILTSLLGN 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g03467 444 Gene3D - 112 365 - -
Trre5g03467 444 PRINTS Haem peroxidase superfamily signature 126 140 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre5g03467 444 PRINTS Haem peroxidase superfamily signature 256 271 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre5g03467 444 PRINTS Haem peroxidase superfamily signature 206 218 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre5g03467 444 PRINTS Haem peroxidase superfamily signature 188 205 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre5g03467 444 PRINTS Haem peroxidase superfamily signature 296 311 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre5g03467 444 CDD ascorbate_peroxidase 97 367 - -
Trre5g03467 444 ProSitePatterns Peroxidases proximal heme-ligand signature. 256 266 IPR019793 -
Trre5g03467 444 Gene3D Peroxidase, domain 2 234 357 - -
Trre5g03467 444 MobiDBLite consensus disorder prediction 263 295 - -
Trre5g03467 444 FunFam L-ascorbate peroxidase S chloroplastic/mitochondrial 112 236 - -
Trre5g03467 444 SUPERFAMILY Heme-dependent peroxidases 104 365 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trre5g03467 444 PRINTS Plant ascorbate peroxidase signature 325 349 IPR002207 GO:0004601|GO:0006979|GO:0020037
Trre5g03467 444 PRINTS Plant ascorbate peroxidase signature 105 125 IPR002207 GO:0004601|GO:0006979|GO:0020037
Trre5g03467 444 PRINTS Plant ascorbate peroxidase signature 187 205 IPR002207 GO:0004601|GO:0006979|GO:0020037
Trre5g03467 444 PRINTS Plant ascorbate peroxidase signature 206 218 IPR002207 GO:0004601|GO:0006979|GO:0020037
Trre5g03467 444 PRINTS Plant ascorbate peroxidase signature 126 141 IPR002207 GO:0004601|GO:0006979|GO:0020037
Trre5g03467 444 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 94 366 IPR044831 GO:0004601|GO:0034599
Trre5g03467 444 FunFam L-ascorbate peroxidase T, chloroplastic 234 357 - -
Trre5g03467 444 ProSiteProfiles Plant heme peroxidase family profile. 129 383 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre5g03467 444 Pfam Peroxidase 113 344 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g03467 Trre-Chr5 31754986 31760637 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g03467 129 359 Peroxidase AT2G18140 28.571 1.66e-17 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g03467 K00434 - aew:130776361 674.47