Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g03291 ATGAAATACAATAGAGAAGGCATGAAGCCAATTTTACCGACACCATCCTCTATCAATCTGCAGAGAGCAAGTCAACTGGGTCAGAGGACTTTCGCGGAGTTGCTCAAAAGAGACATGATCAATGCATATATCTTGAGTCCTGATTCAGCATTATCACCTCTTTTTTTAGGCGCTTCACCTAAGATGGGGATATTTCTTAATGCTATGCGGAAACTAAAACCGAAACTTTTAGTGATTACTGAACAAGAATCAAATCTAAATGGATGTAATTTAATTGAGATAATAGATCGAGCATTATACTTTTACAGTTCACTTTTTGCTGGCTTGGACTCAACTGTTACGAGAACATCAGTAGAGAGACAAAAACTTGAAAGCTTGCTTTTTGGAGAGCAAATAAAGAACATCATTACTTGTGAGGGAGTTGATAGAAAGGAGAGGCATGAGAAGGTTGAGAAATGGATTAGAAGGCTTGATATGCCTGGACTCGAGAAGGTACGTTTGAGTTACAACGGGAGGATAGAAGCAACAAGTCTATTGCAACGTCATAGTCATAAATACAAGTTTAAAGAGGAAAATGATTGTTTGCTTATCTGTTGGAGTGATAGACCACTCTTTTCTGTATCGGCATGGAGTTTTAAGAGATGA 645 0.3814 MKYNREGMKPILPTPSSINLQRASQLGQRTFAELLKRDMINAYILSPDSALSPLFLGASPKMGIFLNAMRKLKPKLLVITEQESNLNGCNLIEIIDRALYFYSSLFAGLDSTVTRTSVERQKLESLLFGEQIKNIITCEGVDRKERHEKVEKWIRRLDMPGLEKVRLSYNGRIEATSLLQRHSHKYKFKEENDCLLICWSDRPLFSVSAWSFKR 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g03291 214 Pfam GRAS domain family 63 210 IPR005202 -
Trre5g03291 214 ProSiteProfiles GRAS family profile. 1 211 IPR005202 -
Trre5g03291 214 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 63 207 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g03291 Trre-Chr5 29278141 29278785 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g03291 14 214 GRAS Transcription Factor Family AT1G50420 46.305 1.16e-52 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Trre5g03291 GRAS 9.8e-45 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g03291 - - mtr:120579480 330.872