Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g03232 ATGCTGCATGACTCTATAACTAGTGTAGGATCACAGCTTCTGAAGCTCTCTGTTCACCAGGATTTTTTGGGTATTGATTCCATTGGTCGACTGTACTGGGCTTTGGCTACACCCAGAGGATGTTCACGTATAGTTGTTGATGCAAGTGCATTTCTTCAGCATGGAAGAGGATTGTCAGTTAGCAAAGATTCTTCAGAGAAGTTTTCTTCTCTGCAGCATTGTGCATTATCTGAGAAGGATAACTATAAGATGTTAGGGTTGATCAAGTATTCCTCTCCTTTGATGTCCCAACCACTTAATGCTTTAGGCAGTAGTTCACTGTGGATTGTTTATGAAACAGATTCAGAAATTGAAGAGCTATTGGGCTGGTTAAAAGATTGTGACCCTAAAGAAAAAGATCCGAGAGATTCCATTATGCTGGGGCCAAAATATAGACCTCAAGAGTTTATTAATGCACACGGTGAAGGTCAGGTTGAGGACCATGGATCTGCTTATTTGCCAAGATATACGATTAATCTACTTGATATGGATGCTGCACTTCCGAGAGTTGCTGTAAGACCATCAAAGGCACAGTTGGACATAAGACAGGCCTGGTGTGCATTTGTCAAATCTGCTGGAACCTGGCAATGCATCTGGACCAACAAAGGGTCTATTCACAACAGAAAGAACGGTCTAGATCCAGCTGAAGCCCCATTTGCTAAAAATCCAAGAGACAGAAATGGGCTTACTGAGGGTGCTAGCCTCAATCATGCACGTCTACATTTCTCGCTTAAGCCGACCAAAAAGCTGTCTGCTGAGGATTTTTGCTACTGGTTCTGGACATCTTTAAATGAAAGCCAAATCAGGATTCAACTAAACCACGGTAACAACAACCGGGACTTCCTGGGTTTAATCGGAGGCCAGTTAGATACAAACATAGGGTTTCAACAGAAACTTTGGAATAAAACTAACAAAGGCGAAGCTTCTCTTGCATCATTGTATAATGAAGTAACCGGTTCATCACCTACTGAAGAGAATAAGATCAATGGCATTTTGCAAGGATTGCCAAAAAAGGCTTTATCTGACAGATAA 1071 0.4174 MLHDSITSVGSQLLKLSVHQDFLGIDSIGRLYWALATPRGCSRIVVDASAFLQHGRGLSVSKDSSEKFSSLQHCALSEKDNYKMLGLIKYSSPLMSQPLNALGSSSLWIVYETDSEIEELLGWLKDCDPKEKDPRDSIMLGPKYRPQEFINAHGEGQVEDHGSAYLPRYTINLLDMDAALPRVAVRPSKAQLDIRQAWCAFVKSAGTWQCIWTNKGSIHNRKNGLDPAEAPFAKNPRDRNGLTEGASLNHARLHFSLKPTKKLSAEDFCYWFWTSLNESQIRIQLNHGNNNRDFLGLIGGQLDTNIGFQQKLWNKTNKGEASLASLYNEVTGSSPTEENKINGILQGLPKKALSDR 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g03232 356 PANTHER OS02G0192300 PROTEIN 2 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g03232 Trre-Chr5 28397869 28400316 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g03232 172 205 C2H2 Transcription Factor Family AT3G01460 61.765 9.85e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g03232 K22768 - gmx:100820223 202.986