Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g03192 ATGGCGGTTCTGTTACCTTCCACAGCAACTATACTCTCTACTCCGTTCGCAAACCGGATTCTTCCACTTCGCCATCACTCCCACGCCTTCTCACCCTCCACCAAACGCTTTCTTCGCGGTTCTCTTTCCGTTGCCCGCTTCGGTTTTCAACCCGGATTTATACCCGAACCGGATGACGCCCATTTCGCTATCAAGGAATTGTTTAACCGAGCGGAGGATACGGTGGTAACCACCGCCATCGCCACCGCCAAGCAGGACAACGATTTGCTTTCATTAATTACCAATTTCGTCGAGACTGTTCTCAAGGTACTTAAGTTTGGGCTTTCTACTTTGCATGTGCCGAATGCTTATGGTTTTGCAATTGTAATGCTTGCAGTTCTTGTAAATGCTGCCATATTTCCGTTGACAAGAAAACAGGTAGAATCTGACATGGCAATGCAATCTTTGAACCCTCAATTAGAGGCCATCGTAAAACAGTATTCCGGGAATTCCAAAAAATCAATTAAACAGAATGTCGAGGATCTGGAGAGACTTAAACTGGAAACTGATCGGTTATATAAATTAGCCAACTTTGATCCTCTATCAGGATTCCTGCCTGTTCTCTTAACAACACCAGTGTGGATCGGGCTATATCAAGCCTTTTCAAAGATGGCAGATGGGGGACCTCTTAGTGAAGGCTTCTTTTGGATACCTTCTCTTTCTGGTCCAACTACAATTGCAGCTCGGCAAAATGGAAATGGTATCTCGTGGCTTTTTCCTTTTGTGGATGGTCACCCTCTCCTTGGATGGCCAGATACATTGGCTTACCTTGTCTTGCCTGTTTTGTTGGTTGTCTCTCGATACATTTCTCTCCAAATAATACCATCATCAGAGGTTGATACTCCCAAAGTGAAGAAGAGTTCTAAAAAAGCCTTCGATGTCAATGTCCTTCTTTCATTAATGGTTGGTTGTTTTGCTCTTTTAGTTCCTTCTGGTCTTAGCCTTTACTGGTTCACAGATAATATATTGAACACTTTACAGCAAATATGGCTTCAAAAGTTAGGAGGTGCAAAAAATCCTCTTGGACAAGTTCTTGATGATGATGTGAAAAATGACCCAATGCAGATTTAG 1110 0.4315 MAVLLPSTATILSTPFANRILPLRHHSHAFSPSTKRFLRGSLSVARFGFQPGFIPEPDDAHFAIKELFNRAEDTVVTTAIATAKQDNDLLSLITNFVETVLKVLKFGLSTLHVPNAYGFAIVMLAVLVNAAIFPLTRKQVESDMAMQSLNPQLEAIVKQYSGNSKKSIKQNVEDLERLKLETDRLYKLANFDPLSGFLPVLLTTPVWIGLYQAFSKMADGGPLSEGFFWIPSLSGPTTIAARQNGNGISWLFPFVDGHPLLGWPDTLAYLVLPVLLVVSRYISLQIIPSSEVDTPKVKKSSKKAFDVNVLLSLMVGCFALLVPSGLSLYWFTDNILNTLQQIWLQKLGGAKNPLGQVLDDDVKNDPMQI 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g03192 369 CDD 5TM_YidC_Alb3 118 346 IPR047196 -
Trre5g03192 369 NCBIfam membrane protein insertase YidC 117 346 IPR028055 -
Trre5g03192 369 PANTHER OXA1 75 345 IPR001708 GO:0016020|GO:0032977
Trre5g03192 369 Pfam 60Kd inner membrane protein 117 346 IPR028055 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g03192 Trre-Chr5 27517326 27525076 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g03192 59 351 Chloroplast and Mitochondria Gene Families AT2G28800 46.580 1.28e-87 269
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g03192 K03217 - gmx:100802546 437.958