Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g03189 ATGGCGGCTCTATTACCTTGCACACCGACTATACTCTCTGCTCCGTTCACAAACCGAACCACAACGCATCTTCCACTTCGCCCTCACTCCCACGCCTTTTCACCTTCCACCAAACGCTTTCTTCGCGGTTCTCTTTCCGTTGCCCGCTTCGGATTTCAACCCGGTTTTTTACCCGAACCGGAAGATGCCGAATTCGTTATCAGGGAATTGTATAATCGAGCGGAGGGTTTTCTTTACACGATTGCCGATGCTGCTGTTTCTTCTTCCGATACGGTGGTAACAACCACCACCACCGCCAAACAGAACAACGATTGGCTCTCTGGTATTACCAATTATATGGAGACTGTTCTCAAGGTCCTCAAGGATGGACTTTCTACTTTGCATGTGCCGTATGCTTATGGTTTTGCAATTATAATGCTTACGGTTCTTGTAAAAGCTGCCACCTTTCCGTTGACAAGAAAACAGGTAGAATCTGCCATGGCAATGCGATCTTTGCAACCTCAAGTAAAGGCTATCCAAAAACAGTATGCCGGGGATCAGGAGAGAATTCAACTTGAAACTGCTCGGTTGTATAAATTAGCCAACATTAATCCTCTAGCAGGATGCCTGCCTGTTCTATTAACAACACCAGTGTGGATTGGGCTGTATCGAGCCTTTTCTAATGTGGCAGATGAGGGACTCCTTAGTGAAGGCTTCTTTTGGATACCTTCTCTTTCTGGTCCAACTACAATTGCAGCTCGGCAAAATGGAAGTGGTATTTCATGGCTTTTTCCTTTTGTGGATGGTCACCCTCCCCTTGGATGGCCAGATACGTTGGCTTACCTTGTCTTGCCTGTTTTGCTGGTTGTCTCTCAATACATTTCTCTCCAAATAATACAATCGTCACAGGCTACTGATCCCAACGTGAAGAGTTCCCAAATCTTAAACAAGGTCCTTCCATTAGTGATTGGTTATTTTGCTCTTTCAGTTCCTTCTGGTCTTAGCCTTTACTGGTTCACAAATAATATATTGAGCACTTTACAGCAAGTATGGCTTCAAAAGTTAGGAGGTGCAAAAAATCCTTTGGGACAAGTTCTAGATGATAATGTGAAAAATGACCCAATGCCGATTCAGAAGTCAGTATCTAAACTAAATTCCACAAAAGTTGAAGAACCTAGAAAAGGTGAAAAATTGACATCAGAGGGGCCACAACCTGGTGACAGATTTAAGCAATTAATGGAACTAGAAGCAAGGAAGAAACAGCAGCGAGAAGAAGAAAAAAGGAAGGCCGAAGAAGCAGCAGCTAAAGCTAATCACGAGCAAACAATTGAAGGGAGAAATCAATCTGTAGGCGACTTCGTTGAAAACTCCCAATCTGTGGGGGCTGATACTGATCCATCCATATCTGGAGTAGTAAATGGTAATCCGTTAAGTAAGGACTTGGAGGGAAATCAGAATTCTACATCTAAATCTGATTCTGAAAATGATGAAGGTTCTGATCATTTCAATGCAGTAAACAAGAAAAGTCTAGAAAAGGGACCAAAAGAAGTATTAACAACCACAACTACAAACAAGCAACCTCATGGAGAAGACCCAGATCACGTGACAAAGGATTGA 1596 0.4305 MAALLPCTPTILSAPFTNRTTTHLPLRPHSHAFSPSTKRFLRGSLSVARFGFQPGFLPEPEDAEFVIRELYNRAEGFLYTIADAAVSSSDTVVTTTTTAKQNNDWLSGITNYMETVLKVLKDGLSTLHVPYAYGFAIIMLTVLVKAATFPLTRKQVESAMAMRSLQPQVKAIQKQYAGDQERIQLETARLYKLANINPLAGCLPVLLTTPVWIGLYRAFSNVADEGLLSEGFFWIPSLSGPTTIAARQNGSGISWLFPFVDGHPPLGWPDTLAYLVLPVLLVVSQYISLQIIQSSQATDPNVKSSQILNKVLPLVIGYFALSVPSGLSLYWFTNNILSTLQQVWLQKLGGAKNPLGQVLDDNVKNDPMPIQKSVSKLNSTKVEEPRKGEKLTSEGPQPGDRFKQLMELEARKKQQREEEKRKAEEAAAKANHEQTIEGRNQSVGDFVENSQSVGADTDPSISGVVNGNPLSKDLEGNQNSTSKSDSENDEGSDHFNAVNKKSLEKGPKEVLTTTTTNKQPHGEDPDHVTKD 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g03189 531 MobiDBLite consensus disorder prediction 486 507 - -
Trre5g03189 531 MobiDBLite consensus disorder prediction 404 432 - -
Trre5g03189 531 MobiDBLite consensus disorder prediction 379 396 - -
Trre5g03189 531 MobiDBLite consensus disorder prediction 359 531 - -
Trre5g03189 531 CDD 5TM_YidC_Alb3 134 347 IPR047196 -
Trre5g03189 531 PANTHER OXA1 83 419 IPR001708 GO:0016020|GO:0032977
Trre5g03189 531 MobiDBLite consensus disorder prediction 434 485 - -
Trre5g03189 531 Coils Coil 402 433 - -
Trre5g03189 531 Pfam 60Kd inner membrane protein 133 347 IPR028055 -
Trre5g03189 531 NCBIfam membrane protein insertase YidC 133 347 IPR028055 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g03189 Trre-Chr5 27486268 27492191 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g03189 62 420 Chloroplast and Mitochondria Gene Families AT2G28800 52.778 7.09e-127 376
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g03189 K03217 - gmx:100802546 737.643