Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g03166 ATGAAGTTAGAAGTGGAAATAATTTCCAAAGAAACAATCAAACCTTCTTCTCCAACTCCTAACCATCTTCGTCATTACCAACTTTCTTTTCTCGACCAAATCGCTCCGATGGTCTACAACCCTCTCGTTCTCTTCTACACTCACAATGACACACTAAACACAACCACCATATCAAACATTCTCAAAGAATCCCTATCAAACATCTTAATCCATTTCTACCCTCTTGCCGGACGAATGAACAATGACAACACTTTCATACATTGCAACGACGAAGGAATTCCTTTCATCGAAGTAAAAATCACAAACTATAAACTCAAAGATGTTATTCAAAATCCAATCCCAAGTGAACTCAATCGTTTGATTCCATTTCAACTTGATGATATCACAAACATCACATTCGGTATTCAACTAAATTATTTTGATTGTGGTGGAATTGCGATCGGTGCTTGCCTTTCTCATCAAATCGCGGATGGTTTATCGTTTTTTAATTTCCTCAATAGTTGGGGAAATATTACTAGAAATTCGCATTTTCCAAAACCTAAGTTTGATTCTTCTAAGCTTTTCCCACCCAAAAATATTTCAGGATTTGACCCTAGAAGTGGTATCACTAAAGAAAATATAGTTTGCAAAATGTTTGTTTTTAATGCTGACGTGGTTGAAAATCTCAGATCAAAATATCGTAATCTTAATCTTAACCCTACACGTGTTGAGGCTTTATCAGCTTTTATATGGAGTCGTTATGTTGATGTGATTTATAACGATGATGTACAAAGAAAATATGGCGTGGTTCATGCGGTGAATCTCCGCCCAAAAATGGAACCACCATTACCTTCAGAATCATTTGGAAACTATTCGCGATTTACTATGACGATTCCAAAGTTGAATAGTGGAGAAGAGTGTTACGGGTTAGCGAAGCAAGTGAGAGATGAGATAAAGAAGATTGATAATGATTATGTGAGGAAGGTTAAAAAAGGTAAGGAGCATTTGGACTTTCTTAAGGAAAGTTATGATAGAGTGGTTGTGAAGGAAGAATTGGTTGTGTTTAATTTTACTAGTTTATGTAGGTTTCCTTTGTATGATGCTGAATTTGGTTGGGGAAAACCTATTTGGGTTGGTTCACCTGCTTTGACATTTAAGAATTTGGTTGTGTTTGTTGATTGTAAGAATGGAGGTGGTATTGAGGCATATGTTAGCTTGAAGGTTGAGGATATGATGAAGTTTGAAGCTGATATGGAGTTACTTGCATGTGTGAATAAAGCAAGGACCTATTGA 1272 0.3616 MKLEVEIISKETIKPSSPTPNHLRHYQLSFLDQIAPMVYNPLVLFYTHNDTLNTTTISNILKESLSNILIHFYPLAGRMNNDNTFIHCNDEGIPFIEVKITNYKLKDVIQNPIPSELNRLIPFQLDDITNITFGIQLNYFDCGGIAIGACLSHQIADGLSFFNFLNSWGNITRNSHFPKPKFDSSKLFPPKNISGFDPRSGITKENIVCKMFVFNADVVENLRSKYRNLNLNPTRVEALSAFIWSRYVDVIYNDDVQRKYGVVHAVNLRPKMEPPLPSESFGNYSRFTMTIPKLNSGEECYGLAKQVRDEIKKIDNDYVRKVKKGKEHLDFLKESYDRVVVKEELVVFNFTSLCRFPLYDAEFGWGKPIWVGSPALTFKNLVVFVDCKNGGGIEAYVSLKVEDMMKFEADMELLACVNKARTY 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g03166 423 Gene3D - 204 419 IPR023213 -
Trre5g03166 423 Pfam Transferase family 4 413 - -
Trre5g03166 423 Gene3D - 1 195 IPR023213 -
Trre5g03166 423 PANTHER F21J9.9 6 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g03166 Trre-Chr5 27228265 27229536 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g03166 3 408 Monolignol Biosynthesis Gene Families AT5G48930 26.742 4.89e-37 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g03166 K13065 - gmx:102670206 595.119