Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g03163 ATGGAGATTTATGGTGGTGATAAGTGTAACGGAAATCGAAAACGGAAAAGATGGTTGTTAAAAAAACTTCTTGTTGATGAAAAAGTTGAGGTAATAAGTTTGGAAGATGGTTTTCTGGAATCATGGCATCCAGGAAAAATTGTTCTCTTTGGGAGGAATAAGCGATATGTTAAATATGACAATATTCTCAATTATGATGAATCATATTACATTGTTACATTGGTCAATGTTTCTAGTGTTTTTGATGGTGTTAATCCTCTATATGGTTCAAATTGTGGCTATGAACATGGCCTAATTAGACCATTGCCTCCTTCATCTGAGTTACGGATAAAGGATCTTCCATTTGGACTTTGTGTTGATGTAAATTATCAAGATGCTTGGTGGGAAGGTGTGATATTTGATCACTTTGATGGAATGGAGGAGATGAGCATATTATTCCCTAATTTGGGTGATGAAATGAAATTTGTAGTTAAACAATTGAGGTTTACTCAAGATTGA 498 0.3414 MEIYGGDKCNGNRKRKRWLLKKLLVDEKVEVISLEDGFLESWHPGKIVLFGRNKRYVKYDNILNYDESYYIVTLVNVSSVFDGVNPLYGSNCGYEHGLIRPLPPSSELRIKDLPFGLCVDVNYQDAWWEGVIFDHFDGMEEMSILFPNLGDEMKFVVKQLRFTQD 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g03163 165 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 20 165 - -
Trre5g03163 165 Pfam Agenet domain 27 104 IPR008395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g03163 Trre-Chr5 27149755 27150814 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g03163 33 165 PHD Transcription Factor Family AT5G58610 42.537 6.32e-31 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g03163 - - vra:106763506 187.193