Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g03106 ATGGAAGTGAATGAGAAAAATGATGTGTATAGTTTTGGAGTATTAGCATTGGAAATACTTTTTGGAAAACACCCTGGAGATATTCTATCTAATTCTTTACAATGGATTATCATGGGATCAACACTTGATACAATGCCATTGATGAATAAGTTGGATCAACGGCTCTCTGGTCCGGTGAATCTACGACAAGCTAAGAAGTTAGTATCTATTGCAAAGACAACAATTTCTTGTTTGGCTGACAGTTCACAATCTCGCCCTACCATGGAGCAGGTTTCTAGGGAGCTTTTAAGTGTGTAG 297 0.3805 MEVNEKNDVYSFGVLALEILFGKHPGDILSNSLQWIIMGSTLDTMPLMNKLDQRLSGPVNLRQAKKLVSIAKTTISCLADSSQSRPTMEQVSRELLSV 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g03106 98 SUPERFAMILY Protein kinase-like (PK-like) 3 95 IPR011009 -
Trre5g03106 98 Pfam Protein tyrosine and serine/threonine kinase 3 95 IPR001245 GO:0004672|GO:0006468
Trre5g03106 98 PANTHER LEUCINE RICH REPEAT KINASE 2 1 97 - -
Trre5g03106 98 Gene3D Transferase(Phosphotransferase) domain 1 1 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g03106 Trre-Chr5 26310693 26310989 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g03106 2 95 Receptor kinase-like Gene Family AT3G24660 31.633 1.80e-09 51.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Trre5g03106 PK_Tyr_Ser-Thr 5.3e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g03106 - - tpra:123888271 175.637