Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g03105 ATGGAGAAAGGTAGTTTGGAAAAGATTTTGAAAGATGATGATGAAGCAATTGCATTTGATTGGAATAAGAGGGCAAATGCCATTAAAGATGTAGCTAATGCTTTATGCTATATGCACCATGATTGCTCTCCTCCGATTGTTCATCGAGATATATCAAGCAAGAATATTCTTTTGGATTTAGAATATGTGGCTCATGTCTCCGACTTTGGAACGGCTAAGCATCTTAATCTTAATTCATCCAATTGGACCTCTTTTGCAGGCACATTTGGATATGCTGCTCCAGAACTTGCATACACAATGGAAGTGAATGAGAAAAATGATGTGTATAGTTTTGGAGTATTAGCATTGGAAATACTTTTTGGAAAACACCCTGGAGATATTCTATCTAATTCTTTACAATGGATTATCATGGGATCAACACTTGATACAATGCCATTGATGAATAAGTTGGATCAACGGCTCTCTGGTCCGGTGAATCTACGACAAGCTAAGAAGTTAGTATCTATTGCAAAGACAACAATTTCTTGTTTGGCTGATAATCCACAATCTCGCCCTACCATGGAGCAGGTTTCTAGGGAGCTTTTAAGTGTGTAG 594 0.3771 MEKGSLEKILKDDDEAIAFDWNKRANAIKDVANALCYMHHDCSPPIVHRDISSKNILLDLEYVAHVSDFGTAKHLNLNSSNWTSFAGTFGYAAPELAYTMEVNEKNDVYSFGVLALEILFGKHPGDILSNSLQWIIMGSTLDTMPLMNKLDQRLSGPVNLRQAKKLVSIAKTTISCLADNPQSRPTMEQVSRELLSV 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g03105 197 Pfam Protein kinase domain 1 191 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre5g03105 197 FunFam MDIS1-interacting receptor like kinase 2 1 197 - -
Trre5g03105 197 ProSitePatterns Tyrosine protein kinases specific active-site signature. 46 58 IPR008266 GO:0004672|GO:0006468
Trre5g03105 197 ProSiteProfiles Protein kinase domain profile. 1 195 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre5g03105 197 PANTHER LEUCINE RICH REPEAT KINASE 2 1 196 - -
Trre5g03105 197 Gene3D Transferase(Phosphotransferase) domain 1 1 197 - -
Trre5g03105 197 SUPERFAMILY Protein kinase-like (PK-like) 1 194 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g03105 Trre-Chr5 26285204 26286185 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g03105 1 197 Receptor kinase-like Gene Family AT5G62230 40.704 2.22e-39 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Trre5g03105 Pkinase 6.6e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g03105 - - tpra:123888271 362.844