Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g03015 ATGGCAGAGATTATTGGCAGGGCATTTCTTTCGCCTGTCTTTCATGTGATTCATGAGAGGGTAACTTCAAAAGATATGAGACTCTACTTCAACGAAGGCCTGGTGAAAGAACTTGAAATTACACTGGTTTCTATCCAAAAAGTGCTCGATGATGCAGAGAAAAAGCAGTACCAATATCCAAACCTGAAGAATTGGCTTGATGATCTCAAACATGAGGTATACGAACTAGACCAGCTATTGGATGTGATTGCTACTGATGTACAACAAATGAGCAAGAAGATGCCACAAAAGAGCAAGAAGATACGACACTGTCTTTCAAGTTCTATTAATCAATTTGTAGAACCAAAAAAAAAAAATTCTATTAATCAATTTGAATCTATGATTATAGTATCACTCAAGAGGATAGATGTTCTTGCGAAGAAAAATGACAAATTAGTATTTCAAGCTAATAATGAAGGCAGAGTCACTCTCCAGATATTACCAACTGCATCTTTCATGGATGATTATGATGTCATATATGGTAGAGAGCATAGATTGGGACTTCACGAATTATCTAGTGCTAATTATGAAATTGGAGTCAACTGGAAATTATTAAGCAAATTTGCAACTGTAACTTTGGTGGATGAATCGGTCATATATGGTAGAGAGCATGAGAAAGAGGAAATACTCAATTTTTTGCTTTCTGACAGTGACAGTGATAAGCAGGTACCCATAATCAGTATAGTGGGTCTAATTGGGATAGGTAAGACAACCCTTGCCCTGCTTGTTTACAATGACCACAAGATAGAGGAGCAATTTGAACTTAAAGCTTGGGTCTCTCTTACAGAATCTTTTGATGTTGTTCGTCTCGCCCAATCAATTCTCAAGTCACTTCATTATTCAGAAGCAGCATATATTAGTGACTTGAATACGCTCCAACATCAATTGCAACATAGGCTGGCCGGAAAGAAATATTTGCTTGTTCTAGATGGTGTCTGGAAAATAGATGGGAATACATGGGAGCAGTTACTACTTATTTTTAAATGTGGATCTTCAGGAAGTAAGATGATCGTGACAACACGTGACAAGGAAGGTGCATCCATCATGAGATCCACCCGGCTACTTCATTTAAAGCAATTGAAGGAGGGTGACTCTTGGAGTGTATTTGTGAATCATGCTTTTCGAGGCAGGAATGTGTTTGATTTTCCAAACCTTGAATCGATCATCAAGAAAATAGTAGATAAATGTGGAGGGTTGCCGTTAGCTCTGAAAACATTGGGGAATCTTTTGGGACTGCGATTCGGTAAACTTGAATGGGACCAGGTATTGGAGACTGATTTGTGGCGTTTATCGGACGGTGACAACAAAATTAACCCCGTTCTGAGATTGAGTTACTTTAATCTCCCTTCCGATCTGAAGCATTGTTTTGCTTATTGTTCTATATTTCCCAAGGGCTATGAGTTTGAGAAGGGTGAACTAATCAAGCTTTGGATGGCAGAAGGTTTGTTGAAGTGTTGTGGAAGAGACAAAAGTGAAGAAGAGTTGGGAAATGAATTCTTTGATCATCTAGTATCAATATCTTTTTTCCAACAATCAGTAATTTTGCCATTATGGGCTGGTAAATACTACTTTGTCATGCATGATGTCGTAAATGATTTAGCGAAATCAGTATCAGGAGAATTCCGCTTACAATTAGAGGGTGATAAAGTGCTAGATATTCCCGAAAAGACACGTCACATTTGGTGCTGCCTTGATTTGGAAGATGGTGATAGAAAACTAAAGCAGATATGTAAATTAAAGGGACTACACAATCTGATGGTAGCACAAGGGTATGGTGACCAACGATTTAAAATAAGCATCAGTATGCAGCATAATTTGTTTTCAAGACTAAAATATTTGCGGATGTTGTCTTTCTCTGGTTGCAATATCTTAGAGCTAGCTGATGAGATAAGAAATTTAAAGCTTCTGCGCTATCTAGACCTTTCATACACTGAGATTACAAGCTTACCTAATTCCATTTGTAACCTGTATAATCTACAGACACTCTTATTAGAAGAATGCTTTAATTTGAGTAAGTTCCCTCCAGATTTTTGCAAACTCATCAATTTACGGCATCTCAATCTGAAAGGAACTCATATTAAGAAGATGCCAAGGGAGATAGGAAGGTTAAAGAATCTTGAGATGCTCACTGATTTTGTTGTGGGAGAGCAGCATGGAATTGATATTAAGCAGTTGGCAGAACTCAACAATCTTCAAGGAAGGCTTCAAATTTCAGGTTTGAAAAATGTCAGTAATCCAGAAGATGCAGTGGCAGCAAATTTGATAGACAAGAAACATTTAAAAGAATTAAGCATGTCATACAATGAATCGAGAGAAATGGATGGATCAGTAACTGAAGCACATGTCTCTGTCTTGAAGGCTCTTCAACCAAATAGAAACCTCATGAGGCTCACAATCAAAAACTACAGAGGCAGTAAGTTTCCAAATTGGCTTGGAGGTCGTCATTTACCCATTTTAGTATCTCTTGAATTGTTGGGATGTAAAATCCGTTCCCAGTTTCCACCACTTGGGCAGTTCCCCTCTCTCAAGAAGCTTTCCATTTCAGACTGTGATGGAATAGAGATCATTGGTACAGAGTTTTGTGGGTATAATGCATCAAATGTTTCATTTACATCCCTTGAAACTTTGCGATTTGAGCACTTGTCTGAATGGAAGGAATGGTTATGTCTTGAAGGTTTTCCTTGGCTTCAAGAGCTTTCGATAAAACATTGTCCAAAGTTGAAAAGTGCCCTGCCTCAACACCTTCCTTCTTTGCAAAAATTGGAGATTATTGACTGCGAAGAGTTAGAAGCTTCAGTTCCTAATGCTGCTAATATCAGTGAGCTTGAACTAAAGAGATGTGATAGCATTTTGATAAATGAATTGCCATCCCGCTTGAAAAGGGTCATCCTTTGTGGAACTCGGGTCATTGAATCCAACCTAGAGAAAATTCTATTTAATAGTGCGTTTCTTGAAGAGTTGGAAGTTGAAGACTTCTTTGGTTCAAATCTAGAATTGTCGTCTTCGGATTTCAATAGCTGTAATTCTCTTCGCACTCTAACTATAATAGGTTGGCACTCTTCTTCCTTGCCTTTTGCACTACACTTGTTCACCAATATTAATTCTCTATTGTTGTACGATAGTCCATGGCTGGAATCATTTTTGGGGTGGCAGTTGCCTTCCAATCTATGCAATTTCAGAATAGAAAGATGCCCCAAATTGATGGCTTCAAGAGAGAAGTGGGGTTTGTTCCAACTCAATTCTCTGAAACAATTCAGGGTTAGTGATGATTTTGAAATCTTCGAGTCCTTTCCAGAGGAGAGTCTGCTGCCATCATCTATTAACTCTCTTGAGTTGACAAATTGTTCCAACCTAAGAATAATAAACTACAAGGGTCTTCTCCACCTGACTTCACTTGAATCTTTATATATTGAAGACTGCCCTTGTCTTGTGAGCTTGCCAGAGGAGGGTCTACCCAACTCTCTTTCTACTTTGTCCATTCATGATTGTCCATTAATTATGCAGCAGTACCAAAAGGAGCGAGGGGAGCGTTGGCATACAATTAGTCACATTCCTGATGTGATAATTTCCTGA 3612 0.3843 MAEIIGRAFLSPVFHVIHERVTSKDMRLYFNEGLVKELEITLVSIQKVLDDAEKKQYQYPNLKNWLDDLKHEVYELDQLLDVIATDVQQMSKKMPQKSKKIRHCLSSSINQFVEPKKKNSINQFESMIIVSLKRIDVLAKKNDKLVFQANNEGRVTLQILPTASFMDDYDVIYGREHRLGLHELSSANYEIGVNWKLLSKFATVTLVDESVIYGREHEKEEILNFLLSDSDSDKQVPIISIVGLIGIGKTTLALLVYNDHKIEEQFELKAWVSLTESFDVVRLAQSILKSLHYSEAAYISDLNTLQHQLQHRLAGKKYLLVLDGVWKIDGNTWEQLLLIFKCGSSGSKMIVTTRDKEGASIMRSTRLLHLKQLKEGDSWSVFVNHAFRGRNVFDFPNLESIIKKIVDKCGGLPLALKTLGNLLGLRFGKLEWDQVLETDLWRLSDGDNKINPVLRLSYFNLPSDLKHCFAYCSIFPKGYEFEKGELIKLWMAEGLLKCCGRDKSEEELGNEFFDHLVSISFFQQSVILPLWAGKYYFVMHDVVNDLAKSVSGEFRLQLEGDKVLDIPEKTRHIWCCLDLEDGDRKLKQICKLKGLHNLMVAQGYGDQRFKISISMQHNLFSRLKYLRMLSFSGCNILELADEIRNLKLLRYLDLSYTEITSLPNSICNLYNLQTLLLEECFNLSKFPPDFCKLINLRHLNLKGTHIKKMPREIGRLKNLEMLTDFVVGEQHGIDIKQLAELNNLQGRLQISGLKNVSNPEDAVAANLIDKKHLKELSMSYNESREMDGSVTEAHVSVLKALQPNRNLMRLTIKNYRGSKFPNWLGGRHLPILVSLELLGCKIRSQFPPLGQFPSLKKLSISDCDGIEIIGTEFCGYNASNVSFTSLETLRFEHLSEWKEWLCLEGFPWLQELSIKHCPKLKSALPQHLPSLQKLEIIDCEELEASVPNAANISELELKRCDSILINELPSRLKRVILCGTRVIESNLEKILFNSAFLEELEVEDFFGSNLELSSSDFNSCNSLRTLTIIGWHSSSLPFALHLFTNINSLLLYDSPWLESFLGWQLPSNLCNFRIERCPKLMASREKWGLFQLNSLKQFRVSDDFEIFESFPEESLLPSSINSLELTNCSNLRIINYKGLLHLTSLESLYIEDCPCLVSLPEEGLPNSLSTLSIHDCPLIMQQYQKERGERWHTISHIPDVIIS 1203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g03015 1203 SUPERFAMILY L domain-like 538 943 - -
Trre5g03015 1203 Pfam NB-ARC domain 216 437 IPR002182 GO:0043531
Trre5g03015 1203 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 203 472 IPR027417 -
Trre5g03015 1203 PRINTS Disease resistance protein signature 238 253 - -
Trre5g03015 1203 PRINTS Disease resistance protein signature 312 326 - -
Trre5g03015 1203 PRINTS Disease resistance protein signature 409 423 - -
Trre5g03015 1203 PRINTS Disease resistance protein signature 926 942 - -
Trre5g03015 1203 SMART LRR_typ_2 646 669 IPR003591 -
Trre5g03015 1203 SMART LRR_typ_2 693 716 IPR003591 -
Trre5g03015 1203 PANTHER DISEASE RESISTANCE PROTEIN RP 35 940 IPR044974 GO:0006952
Trre5g03015 1203 Gene3D Ribonuclease Inhibitor 968 1184 IPR032675 -
Trre5g03015 1203 Gene3D - 196 367 IPR027417 -
Trre5g03015 1203 Gene3D - 28 122 - -
Trre5g03015 1203 Gene3D - 458 550 IPR036388 -
Trre5g03015 1203 Gene3D - 372 457 IPR042197 -
Trre5g03015 1203 Gene3D Ribonuclease Inhibitor 586 967 IPR032675 -
Trre5g03015 1203 Coils Coil 35 55 - -
Trre5g03015 1203 SUPERFAMILY L domain-like 883 1180 - -
Trre5g03015 1203 CDD NK 238 286 - -
Trre5g03015 1203 Pfam Rx N-terminal domain 9 96 IPR041118 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g03015 Trre-Chr5 24490590 24494201 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g03015 626 722 WRKY Transcription Factor Family AT4G12020 37.755 4.28e-08 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g03015 - - mtr:11411709 1530