Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02975 ATGTTACCGTTTTGCTCAGCAACACCGTGTTATTCCCCTTCTTCTCAGATTCCTTTATTTGGGGGATTTCAATCTCTGTATCCAATTCGAAAGGATTTTGAGAGTAAATGTGTTGCAGAAGAAAGTTTACATTTAGGTTTGCATTATGGAACACCTTCAATTAGAAATTCATTTGCAACACAAGCTATAAAGAATGTTTCAGTATGGGAAAATTCATATTCACTTAGTAATGGTGAATTTAGATATAGTTTATCGACCGTGCCGGAGGAATTAGTAGACTTTGCAGGACAGTCAACTGAAGGATCTGATGCATTAGTAGTACCTGTACAACCAGAAGCGATATTGAGTACTGATATATCGTCGGGGAAGTTTGAATCTGTGTCTAGTTTGATTCAAGGGGGTAATGAATCGTTAGACGCAACAAAAGCAAGTGTCGGTGACCTTGTTTCTGGAGTAAACGAGTCATTCAATGCCGCTGTTAATAAGGGAGAAGATGTTTTACGAAGCTCGCTGGATACGGCTACTTCTTTTGTTGATTCTATTGTTAAAAATGCTACTACATCTGCAGATAATGCTTTTAGTAAGGTGTTTTCTTCTGTTGATCAAACGGGGGATTTGGCGAGTAAGAAAATTACTAGTGTTTCGAGTGGGATAAATGGAGTCACGAGTAAGGCACCTGCTTTGGTTATTGATGTGTTGCGCCGCACAGTCGTTGTGGTAGAGAGTTCTTTATCAAAGGGGGCTTCCTATGTTGTTTACTTGTATGGATCAGCCAAGGAGGTTCTTCCTGCAGAGATTAGGGATTCAGTCAATGTATATGAAGGAAAAGCAACACAAATCTTAAGGCCTGTTGGGTCTGCAACTCAACAGATATACACGGCTTTCTATTCATTGGAGAAGAGTCTTGGTTTGGATCCAAACGACCCAATTATTCCATTTGTTGTTTTTGTCGGCTCTTCAGCAACATTATGGGCTATTTATTGGTTGTGGAAATACGGAGGTTACTCAGGAGATTTATCCCCTAAATCAGCTTTTGAGCTCTTGACTGGGGACTCAAATGCTGTACTTATAGACGATTTGCGAGAAAAAGATGGTATTCCTGATATTCGACGGGCTGCTCGGTTTCGCTATGCAAGTGTATCTCCAATCGAGGTTGATGGCTCCATACGCAAGTTGTTGAAGGGTGGTAGAGACTTGGATGACTTCTTGGTTGCTGTTGTGATTCACAATTTGAAAATTGTTAAGGACAGTTCAAAGGTTATTGTGTTGGATGCTGATGGTACTCGTTCTAAAGGCATTGCAAGGTCCTTGAAGAAAATTGGTATCAAGAATCCATACTTGGTCCAAGGTGGCTTTCAGTCTTGGACTAAACAAAGTCTCCGCATCAAGGAACTCAAACCTGAAACAGCATTTACCATACTTAACGAGGAAGCTGAAGCCATTCTAGAGGATATTAGACCTTCTCCTTGGCAACTTTTAGGTTATGGTACGGCACTACTTGCAGGGTCATATGGATTAGTAGAGTGGGAGAAAACATTGCAGTTTATTGGTGTTTTTGGCCTCGGTTTGACCTTATATCTGCGGGTTTCTTCATATGAAAGGTCAGAAGATTTGACACAAGATGCAAGGCTATTGCTTGCTCCTGTTAAACTTGGAGGTCAGGCGTTTTCATGGGCTGCCGGAAAATTGGAATCAAATGGCATAGGGTTACCTACATCACCTTCATCTTTAGATGTTCAGAACCGGGTGTTACAGGCCGCTGCCAAACATGAATCCCAACCATCTGACAGTGAAGGTAACCAAGACCCGAATCCCGAATCCACAGTTACTCTCAATCAAAATGCATGA 1848 0.414 MLPFCSATPCYSPSSQIPLFGGFQSLYPIRKDFESKCVAEESLHLGLHYGTPSIRNSFATQAIKNVSVWENSYSLSNGEFRYSLSTVPEELVDFAGQSTEGSDALVVPVQPEAILSTDISSGKFESVSSLIQGGNESLDATKASVGDLVSGVNESFNAAVNKGEDVLRSSLDTATSFVDSIVKNATTSADNAFSKVFSSVDQTGDLASKKITSVSSGINGVTSKAPALVIDVLRRTVVVVESSLSKGASYVVYLYGSAKEVLPAEIRDSVNVYEGKATQILRPVGSATQQIYTAFYSLEKSLGLDPNDPIIPFVVFVGSSATLWAIYWLWKYGGYSGDLSPKSAFELLTGDSNAVLIDDLREKDGIPDIRRAARFRYASVSPIEVDGSIRKLLKGGRDLDDFLVAVVIHNLKIVKDSSKVIVLDADGTRSKGIARSLKKIGIKNPYLVQGGFQSWTKQSLRIKELKPETAFTILNEEAEAILEDIRPSPWQLLGYGTALLAGSYGLVEWEKTLQFIGVFGLGLTLYLRVSSYERSEDLTQDARLLLAPVKLGGQAFSWAAGKLESNGIGLPTSPSSLDVQNRVLQAAAKHESQPSDSEGNQDPNPESTVTLNQNA 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02975 615 Gene3D - 335 468 IPR036873 -
Trre5g02975 615 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 323 462 IPR036873 -
Trre5g02975 615 MobiDBLite consensus disorder prediction 585 615 - -
Trre5g02975 615 ProSiteProfiles Rhodanese domain profile. 407 464 IPR001763 -
Trre5g02975 615 CDD RHOD 411 455 - -
Trre5g02975 615 PANTHER RHODANESE/CELL CYCLE CONTROL PHOSPHATASE SUPERFAMILY PROTEIN 1 612 IPR044690 GO:0009704|GO:0071277|GO:0090333
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02975 Trre-Chr5 23961841 23967941 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g02975 312 425 Sulfurtransferasese or Rhodanese AT5G23060 26.984 9.42e-08 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02975 - - gmx:100786142 896.73