Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02967 ATGAGCATAAATTCAAATTATACTTTATTTCATTCAGTTACCAGATTGAATCAAACCAGCTATGAAGTTTGTTTTGATGCTCCACCCCATATTGTTTCAGATGGTTTATGGGGTGGTAAAGAAAATGGAAGAACTCCAATGAGATCTTTCTTTCCCATGTTTGAATTACAACTCCTTATAATTTTTGTCCTCACCCAAATTTGCAGTTTTCTTCTCAAACCCTTAAAACTCCCTCAATTCATTGTACAAATGATTGCTGGATTGATTATAGGTGTTACATTTGAGATAAAGCCATTGGAGAAATACATGACCATTTTGTTTCCATATGTAATTGCTTCCCTCTTGAGTGAACTACAAATCCAAAACTCTGAGATTGGCCGATTGGCTTTGTCGTCGGCTTTGGTCGGTGACATATTAAGAACAACTATTACAACAAATATTGTTGTTGTTATGGGTGTTTTATCAGTTAAGATTGATCAAGAATTTGTCTTAGGAGCTTTCGTTTTGGGTCTTGCCGTGCCCGAAGGACCTCCTTTAGGATCTGCATTGGTTAAGAAACTTCAGTTCTTTGGCATAACATTATTTTTACCTATCTTTGTGACTACCTCTGTGTTGAAAGCAGATTTTACAATGAATTTTTCATCATATCTGATGGTGTCAACTGGAATTGTGATCCTTATTACTCACTTGGTCAAAATAATAGTATGTTTTATAACTGCTCTTTGTTGCAAGATGCCCGTTACTGACGCTTTATGTCTTTCCCTCATTTTGAACACTAAAGGCGTAGTTGAAATTGGCATCTTCAATGCGTTATTCGATAATGATATTATTAATGGGCAAGCGTATGCAGTGTTGATTATAAGTGTAATGATCATAGGAAGCATTGTGCATTGGTCAGTGAAATTATTATACGATCCAACGAGAAAATATGCTGGATACCAAAAAAGGAACATAATGGGATTAAGAAGAAACTCAGATCTCAGAATACTAATAACACTTCAAAAACAAAACCATATTTCAGCTGCAATAGATTTCTTAGACCTATGTTGTCCAACACAGGAATCTCCAATCGCGGTTGATGTAATTCACGTAATTGAGCTAGTTGGAAGAGCCTTGCCTGTTTTCATTCCTCATTGTCTTCAAAGACAAGCATCAGGATCTGCTTCGCATAAATCATACTCTGACGATGTTATCCTAGCTTTCGATATCTATGAGCATGATAATGAAAATGCAGTTTCAATAAACACTTACACAGCAATATCACCAGCAAATCTCATGTTTGAAGATGTGTGTAACCTTGCATTGGATAAAGTTGCATCCATCATCATTCTTCCATTTCATATAAGGTGGTCTGCTGATGGTGTAGTTGAATCTGATGACAAGAAAATTTTAAGAGCATTGAACCAAAAAGTCCTTGAAATAGCTCCATGTTCCGTTGGAATTCTCGTAACTCGCATTAATTTGATGCCAAAAGCAACCCCAACAACATCAGTAACATCAGAATATTCCACCAACCGATTAGCTGTCATTTATTTAGGTGGAAGCGACGACGATAATGAGATTTTATGTTTAGCAAAGCGAGCCATGAATAATCCTAGTATCAACTTAGTTCTTTACCATCTTGTCTCTAAGGATTGTATAGAGGAATTAGAGGATTTGATGGTAAATGGTGGTGAACTATTGCAAGAAATGAAAAATGCTGAAAGTGTGAGGTATCAACAGATTTTCACAAAGGATGGATCACAAACAGCTTCCTTTTTACGCGAGATTGCCAATGAACATGATTATTTTATTGTCGGTAGAAGACATGGAATCCGATCTCCTCAAACTGATGGATTATCAGAATGGAGTGAATTTCCTGAACTTGGTGTTATTGGTGATTTTCTTGCCGCACCTGATCTTAATAGTTGTGCATCTGTTATGGTTGTGCAGCAACAACTTTCACGCAAGAAAGAGCTTAATGGGTGGATTTTGTAG 1977 0.3652 MSINSNYTLFHSVTRLNQTSYEVCFDAPPHIVSDGLWGGKENGRTPMRSFFPMFELQLLIIFVLTQICSFLLKPLKLPQFIVQMIAGLIIGVTFEIKPLEKYMTILFPYVIASLLSELQIQNSEIGRLALSSALVGDILRTTITTNIVVVMGVLSVKIDQEFVLGAFVLGLAVPEGPPLGSALVKKLQFFGITLFLPIFVTTSVLKADFTMNFSSYLMVSTGIVILITHLVKIIVCFITALCCKMPVTDALCLSLILNTKGVVEIGIFNALFDNDIINGQAYAVLIISVMIIGSIVHWSVKLLYDPTRKYAGYQKRNIMGLRRNSDLRILITLQKQNHISAAIDFLDLCCPTQESPIAVDVIHVIELVGRALPVFIPHCLQRQASGSASHKSYSDDVILAFDIYEHDNENAVSINTYTAISPANLMFEDVCNLALDKVASIIILPFHIRWSADGVVESDDKKILRALNQKVLEIAPCSVGILVTRINLMPKATPTTSVTSEYSTNRLAVIYLGGSDDDNEILCLAKRAMNNPSINLVLYHLVSKDCIEELEDLMVNGGELLQEMKNAESVRYQQIFTKDGSQTASFLREIANEHDYFIVGRRHGIRSPQTDGLSEWSEFPELGVIGDFLAAPDLNSCASVMVVQQQLSRKKELNGWIL 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02967 658 Gene3D - 139 311 IPR038770 -
Trre5g02967 658 Coils Coil 547 567 - -
Trre5g02967 658 PANTHER CATION/H + ANTIPORTER 142 646 - -
Trre5g02967 658 Pfam Sodium/hydrogen exchanger family 147 291 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02967 Trre-Chr5 23901792 23904505 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g02967 143 646 Antiporter Super Family AT5G22900 37.403 3.67e-110 349
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02967 K26731 - mtr:11420455 794.653