Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02942 ATGTCTTCTAAACATAATGATACATTTGCTCAATTTAAAACATGCATATACCTGCCTCCGCGGGTAAATTCGCAGAAACCATGGTATCAAATGGCCGATACTCGCTCGTTTTTAGAAAATTCTTTGCCTGTGTTGCAGATACAGATGTGTTTGATCTTTTTTGGAACTCTTTTCTTCAAATCTATATTATGTCGTTTTGGAATCCCCAAGTTCACATCTATGAGCATTGTTGGTCTAATCTTTGCAGCTACATTCAATAATAATTGGACTGGAAAAATGAAGATGTTGTTTTCCTTTGATTCACAAGAAAATCTAGGACTAATATCAATATTTGGTTACATGTTTTTCCTATTCTACATTGGTGTCAAAACAGATATGAGTGTTGTTCACAAAACTAAAAATGGTGTCACCAACATAAGTTCTATTGCTATAATAGCTCCATATCTATGTAGCATGGTTGTTCTAAATTCCTACTCATCAAAATACCTACAACCTTTGCAAGTAAATATCCTTGGAGCTATCATTGGATTGTTTTGTATGGTATCTTTTCCAGTAATTTCTTCAACTTTAAGTGATATAAAGATTCTCAATTCAGAATTGGGTCGAATCGGTCTATCAGCATCATTAGTTAGTGAGATTTTCAATGTGTTCTTAGCATCATTGATAACATTTTCTAAATTATATGGAGAGCGTGGTCCAGCGAATGCTTTGGTTTGCGTTGCAGCCGCTATCTTGTATATACTAATGGTTATATTCATTATCCGACCCGCGATGTTTTGGATTATAAAACAAACACCGGAAGTCATTGTTGTTGTCAAATTTGTTGCTTGTATGATTATTCCTTTACGCTTTGGGATGCCATGGAATGATGCTATTTGTTTATCTTTAATTATGAGTTCCAAAGGTGTTGTGGAAATGGCTGCTTTCTCTATGGCCAGAGATTCCAAAGGTCTACCGGATAACATATTTTCATTATTGATGATATGCATCATAGTAAACGGAACATTGATTCCAATGATGTTGCGTTATATGTACGATCCAACGAAGAAATATGTCGGTTACACAAAGAGAAACATAATAGATCTAAAAAGTAGCTCAGAACTTCGAGTTTTAACATGTATTCATAGACCAAACGACATTCCAGCAACAATAAATCTTCTAGAAGCAACATATCCAACAAAAGAACAACCAATTTGCACTTATGCACTTCAACTTGTTGAATTAATAGGAAGAGCATCACCAATTTTCATCTGTCATAATCTTCAAAGAAAGAAGAAATTAAATTCAAACACATCAATGGCAGATAAGTTACTAGAATCATTTCAAAGTTTTGAAAGAGAGTTCCAAGATTGTTTAGTTGTCAATTCATTCACAGCTATCTCGCCACTAGAAATGATGTACGATGATATATGTACATTAGCACTCGATAAGTATACATCGCTTATTATTCTTCCTTTTCATCGAAAATGGTTTTGCGATGGTAACTCAGTTGAGCTAGAAGATGAGTCATTAAGGGATATAAACTATAGAGTTATGGAAAGAGCACCATGTGGGAAAGATGATAGAGAAGCACTTTTTTTCACAAAGAGAATGTCTAAGAATCCACATGTTAAACTTACCGTGGTTCGATTCTTGTCATCCGATGATGTTGACGAAGATTCGAACGGAAATGGTTGTGAAGGTTTACTTGATAATGAACTATTGGATGAAATAAAGACAAGGAATAAAATTGGTAATGTTAGTGTTAAATATATTGAGGAAAAAGTGAAAGATGGGCCTGAAACAACATTGATTATAAGATCTTATGTAACTGAATTTGATTTGATTATTGTTGGGAGACATGCTAGAGTTGAAACTCCTCAAACTTGTGGATTGTTGCAATGGAGTGAGTATCCTGAACTTGGTGCTTTGGGAGATTTGTTGGTTTCTACTGATGCTGGTGGTAAAGCTTCTGTTTTTGTTATACAACAGCAAAGAACAGCTATGGATGTTTAA 1995 0.3449 MSSKHNDTFAQFKTCIYLPPRVNSQKPWYQMADTRSFLENSLPVLQIQMCLIFFGTLFFKSILCRFGIPKFTSMSIVGLIFAATFNNNWTGKMKMLFSFDSQENLGLISIFGYMFFLFYIGVKTDMSVVHKTKNGVTNISSIAIIAPYLCSMVVLNSYSSKYLQPLQVNILGAIIGLFCMVSFPVISSTLSDIKILNSELGRIGLSASLVSEIFNVFLASLITFSKLYGERGPANALVCVAAAILYILMVIFIIRPAMFWIIKQTPEVIVVVKFVACMIIPLRFGMPWNDAICLSLIMSSKGVVEMAAFSMARDSKGLPDNIFSLLMICIIVNGTLIPMMLRYMYDPTKKYVGYTKRNIIDLKSSSELRVLTCIHRPNDIPATINLLEATYPTKEQPICTYALQLVELIGRASPIFICHNLQRKKKLNSNTSMADKLLESFQSFEREFQDCLVVNSFTAISPLEMMYDDICTLALDKYTSLIILPFHRKWFCDGNSVELEDESLRDINYRVMERAPCGKDDREALFFTKRMSKNPHVKLTVVRFLSSDDVDEDSNGNGCEGLLDNELLDEIKTRNKIGNVSVKYIEEKVKDGPETTLIIRSYVTEFDLIIVGRHARVETPQTCGLLQWSEYPELGALGDLLVSTDAGGKASVFVIQQQRTAMDV 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02942 664 Pfam Sodium/hydrogen exchanger family 50 263 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Trre5g02942 664 Pfam Sodium/hydrogen exchanger family 268 340 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Trre5g02942 664 PANTHER CATION/H + ANTIPORTER 270 517 - -
Trre5g02942 664 Gene3D - 268 352 IPR038770 -
Trre5g02942 664 Gene3D - 44 267 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02942 Trre-Chr5 23577542 23580732 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g02942 271 659 Antiporter Super Family AT5G22900 38.605 8.44e-99 319
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02942 K26731 - gmx:100785558 545.814