Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02924 ATGTTGCCTGTGGAGTTGCTAGAGAAAAGAATACAGATCAATAAAGTTGGACGAACGGCTTATAGAATGAACTTCACAAAACTTTGTCATGCAACAAATTACTTTAGTAAGGACAATGTTATTGGGGTGGGAGTGATTGGAATAATGTACAAAGCAACATTTCCCAACACAATTGTTTCTTGGCAGTTAAGAAACTACATGATTCTCAATTGTGTATCGAAAGAAGAAGAAAAAAATGAAAGAATTTTGGTGTTTCAATACATGTCAAATGGAAGACTTTCTGATTGGTTGAATGATGATACTACAAAATTAGGATGGACAAGGGTTATTAAAATTGCACTTGGTGTAGCAAGAGGTTTATGTTGTCTCCATCATAGTTTGCATATGGTTCATCTTAGTGTAAGCTTAGACTGTATCTTGTTAGGGGACAATTTCGAGCCGAAAATATCCAATTTTGGAGGAGTCATGTTTATCAATAATGATTTGAACAAAAACATTGAGAAGAAGGATGTTTATGACTTTGGTTGTTTGCTTTTTGAGTTGATTAAGGGGAAGAAATTTGGCCAAAGACATGATTGTTTAAGCAATAATAATGTTCCGTTCACGACATACACATATCCAAATCCTATTAACCTATTGGAGGACCATTTTGGGTTCTATGATGTAATGGATGAAACACTAAACAAGATAGAATTTTATGATGAGGTATCTTCTCTTCTTAGAGTTGCATGTGATTGTGTTCATCCTATCCTTGAAAAAAGGCCTACTATGCTTGAGGTGTACAATAAGATGGGAAACATATGGGAGAAAGATGAGATTTTTGAAGATCATGACCAATTTGGCCTAATGCATAACTCTTAA 861 0.3449 MLPVELLEKRIQINKVGRTAYRMNFTKLCHATNYFSKDNVIGVGVIGIMYKATFPNTIVSWQLRNYMILNCVSKEEEKNERILVFQYMSNGRLSDWLNDDTTKLGWTRVIKIALGVARGLCCLHHSLHMVHLSVSLDCILLGDNFEPKISNFGGVMFINNDLNKNIEKKDVYDFGCLLFELIKGKKFGQRHDCLSNNNVPFTTYTYPNPINLLEDHFGFYDVMDETLNKIEFYDEVSSLLRVACDCVHPILEKRPTMLEVYNKMGNIWEKDEIFEDHDQFGLMHNS 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02924 286 ProSiteProfiles Protein kinase domain profile. 1 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre5g02924 286 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 23 270 - -
Trre5g02924 286 Pfam Protein tyrosine and serine/threonine kinase 63 263 IPR001245 GO:0004672|GO:0006468
Trre5g02924 286 SUPERFAMILY Protein kinase-like (PK-like) 20 262 IPR011009 -
Trre5g02924 286 Gene3D Phosphorylase Kinase; domain 1 5 62 - -
Trre5g02924 286 Gene3D Transferase(Phosphotransferase) domain 1 167 282 - -
Trre5g02924 286 Gene3D Transferase(Phosphotransferase) domain 1 88 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02924 Trre-Chr5 23404151 23405218 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g02924 22 267 Receptor kinase-like Gene Family AT5G07280 28.716 1.55e-25 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Trre5g02924 PK_Tyr_Ser-Thr 5.5e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02924 - - gmx:102663800 330.872