Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02903 ATGGTGAGTGTATCTGGCTTTGAAGAAGTTGTTGAGCCACCAGCTTTACCTCCATCGCCTCCTAATGTGCTTCCTGATATGGAAACAGAAGAAATAGCTCTCCCAACCTATTCTATTATCAGTAGGCCTGGTGTTGGGACCACAGGGAAGTGCATAGCTTTGCTTGTAAACCTCTTCAAAGTTGCCGCTGATGCTACAGATGCAACCTTTTACCAGTATAGTGTTACAATAACTTCAGAAGATAAAAGAGCTGTCGAAAACAAGGGCATTGGGAGAAAACTGATTGATAGGCTTCTCCAAACATACTCTTCTGAACTTGGCGGCAAAAGATTTGTGTATGATGGAGAAAGAACTTTGTACACAGTCGGCCCTCTTCCGGATAATAAATTTGAGTTCACAGTATTACTCGAGGAATCATTTTCCAAGCGCAGCAGTACTGAGTATCCTGGTGCTGATGGAAGTCTTCATGGGGAAAATAAAAGGTCAAAACGTTCTTTTCCGCCAAAGGCTTTCACAGTGGAGATAAGTTTTGCTGCCAAAATACCCTTGCAATCCATTGCTCTTTCCCTTAAAGGGATTGAGTCACATGCTAATTCTCAGGATGCATTGAGGGTGCTTGATACCTATTATAGTTTCACCATTGTTGGTGATGAAGATTTGAGAGAGAAAGAAAGAGAGAAAGAAAGAGAATCTGTAACTGACTTTGTAACTGAATTTGTTATTGATTAA 729 0.4102 MVSVSGFEEVVEPPALPPSPPNVLPDMETEEIALPTYSIISRPGVGTTGKCIALLVNLFKVAADATDATFYQYSVTITSEDKRAVENKGIGRKLIDRLLQTYSSELGGKRFVYDGERTLYTVGPLPDNKFEFTVLLEESFSKRSSTEYPGADGSLHGENKRSKRSFPPKAFTVEISFAAKIPLQSIALSLKGIESHANSQDALRVLDTYYSFTIVGDEDLREKEREKERESVTDFVTEFVID 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02903 242 MobiDBLite consensus disorder prediction 144 163 - -
Trre5g02903 242 MobiDBLite consensus disorder prediction 1 23 - -
Trre5g02903 242 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 33 208 - -
Trre5g02903 242 Pfam N-terminal domain of argonaute 52 207 IPR032474 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02903 Trre-Chr5 23229860 23230732 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g02903 42 207 Eukaryotic Initiation Factors Gene Family AT1G48410 36.095 7.98e-17 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02903 K11593 - gmx:100778875 255.373