Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02893 ATGGCGGCGAGCAAGAAAGGGAGTATAAGTTTAGAAGGAAAGAAGGTTATACTGGTCCCTTACATGGAACCTCACGTTCCCAAATATCACCAATGGATGCAAGACCCTTCTCTTCTTGAAGCCACTGCTTCCGAACCTCTTTCCCTCGAGCAAGAGTATCAGATGCAACTTTCCTGGTCACGTGATCTCAACAAGGAGACATTCATTGTCTTGGATAAAGATTTACTTGTTGGAACCTTCTCTCACGGTCAATCCCATGTTGAAGCTATGGTTGGTGATGTAAATATCTTCATGAATGACATCAATAATCCTCAAATTGCAGAGGTTGAAATTATGATAGCTGAACAAACAAGCCGTGGCAAAGGACTTGGAAAGGAGTCTGTTCTGATAATGATGGCCTTTGCTATTGAGAAATTGGGGATCAAAAGCTTTCAGGTTAAAATTGGAGAATCAAATGTAGAGTCCATCAACCTGTTCAAAAAATTGGGATTTGTGCAAACTTCACATAGCAACATTTTCAAAGAGGTAACTTTGGAGTTGCAAATAACCGAAGCTAAGAGCGAGGAGATGCTTTGTTTGATGGGTTCTGTGATCAAACACACATAA 606 0.4076 MAASKKGSISLEGKKVILVPYMEPHVPKYHQWMQDPSLLEATASEPLSLEQEYQMQLSWSRDLNKETFIVLDKDLLVGTFSHGQSHVEAMVGDVNIFMNDINNPQIAEVEIMIAEQTSRGKGLGKESVLIMMAFAIEKLGIKSFQVKIGESNVESINLFKKLGFVQTSHSNIFKEVTLELQITEAKSEEMLCLMGSVIKHT 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02893 201 Gene3D - 5 175 - -
Trre5g02893 201 FunFam Acyl-CoA N-acyltransferases (NAT) superfamily protein 4 171 - -
Trre5g02893 201 Pfam Acetyltransferase (GNAT) domain 16 165 IPR000182 GO:0016747
Trre5g02893 201 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 10 167 IPR016181 -
Trre5g02893 201 PANTHER N-ACETYLTRANSFERASE 9 6 191 IPR039135 GO:0008080
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02893 Trre-Chr5 23146711 23151229 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Trre5g02893 Acetyltransf_3 6.9e-23 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02893 K25762 - gmx:100817900 303.908
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g02893 5 23146711 23151229 Trre5g02893 5 23146711 23151229 ECH