Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02883 ATGATACAAAATCCAGAATTTCAGAATCCAACTAGTAAAATTTCAGATCTGGGTGGGAAGGAAATTAATGAAGGAAAGAAAATAGAGTTGTACATTAAAATGAGAGGTAAAGAAAAAAAGATGGGGAAGTATAATTTACCAAATGAAAGGAAAAAAGATTGGCTTGATGCACTTTTGTTAGATAACTTTGGTAATTGCAAGAACCATCAAGAAAAGTTTAATGAGAAGAATGTGTTTTGTGTAGATTGTGGAATGAGTTTATGTAGACATGGTAAAGAATCTCATTCCCTTCATCAAAGGTTTCAAATTTACAAATATAGTTATCAAGATGTTGTCAAATATTCTGACCTACTCAAGTATTTTGATTGCTCAAATATTCAGACATATATATTAAACAATAACAAGACTGTGCATCTCAAACCTCGACCTTTATCAAAAGAAAAGAAACTAGCAATAAAACCTAAAGTTGCTGGTTTAAGCCATGAGTCTCAAATCAAGGAAACAAAAACATTTACATCTCATAAAAAGCTTGGTGGAATTTGTGAAGAATGTGGCAAACATTTACAAGACAAGCGTAACCGATTTTGTTCCGTTAGATGCAAGATGTCAATTGAGGAGCTTGGACTAATAAACCAAAATTCAGAGGCCGAGTCATCTATCTCTATTATGACTGAACCATATGAATATGTTGAAAGAGTGAATTTTAGAAAGCGTCCAAGGAAAAACACCCCAATGAGATCTCTCTAG 747 0.328 MIQNPEFQNPTSKISDLGGKEINEGKKIELYIKMRGKEKKMGKYNLPNERKKDWLDALLLDNFGNCKNHQEKFNEKNVFCVDCGMSLCRHGKESHSLHQRFQIYKYSYQDVVKYSDLLKYFDCSNIQTYILNNNKTVHLKPRPLSKEKKLAIKPKVAGLSHESQIKETKTFTSHKKLGGICEECGKHLQDKRNRFCSVRCKMSIEELGLINQNSEAESSISIMTEPYEYVERVNFRKRPRKNTPMRSL 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02883 248 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 49 213 - -
Trre5g02883 248 Pfam PLATZ transcription factor 105 202 IPR006734 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02883 Trre-Chr5 23006139 23010076 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Trre5g02883 PLATZ 3.1e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02883 - - mtr:25482577 259.225