Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02881 ATGGGGAAGTATAATTTACCAAATGAAAGGAAAAAAGATTGGCTTGATGCACTTTTGTTAGATAACTTTGGTAATTGCAAGAACCATCAAGAAAAGTTTAATGAGAAGAATATGTTTTGTGTAGATTGTGGAATGAGTTTATGTAGACATGGTAGAGAATCTCATTCCCTTCATCAAAGGTTTCAAATTTACAAATATTGTTATCAAGATGTTGTCAAATATTATGACCTACTCAAGTATTTTGATTGCTCAAATATTCAGACATATATATTAAACAATAGTAAGACTGTGCATCTCAAACCTCGACCTTTATCAAAAGAAAAGAAACTAGCAATAAAATCTAAAGTGGGTAGTTTAAGCCATGAGTTTCAAATCAAGGAAACAAAAACATCAACATCTCGTAACAAGCTTTTTGGAATTTGTGAAGAATGTGGTAAACATTTACAAGACAAGCGTAAGCGATTTTGTTCCGTTAGATGCAAGATGTCAATTGAGGAGCTTGGACTAGTAAACCAAAATTCAGAGGCCGAGTCATCTATCTCTATAGCTGAATCATATGAATATGTTGAAATAGTGAACTTCAGAAAGCGTCCAAGGAAAAGCACCCCTATGAGATCTCTCTCTAGCTTTGTATATTGCAATTGA 645 0.3318 MGKYNLPNERKKDWLDALLLDNFGNCKNHQEKFNEKNMFCVDCGMSLCRHGRESHSLHQRFQIYKYCYQDVVKYYDLLKYFDCSNIQTYILNNSKTVHLKPRPLSKEKKLAIKSKVGSLSHEFQIKETKTSTSRNKLFGICEECGKHLQDKRKRFCSVRCKMSIEELGLVNQNSEAESSISIAESYEYVEIVNFRKRPRKSTPMRSLSSFVYCN 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02881 214 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 9 176 - -
Trre5g02881 214 Pfam PLATZ transcription factor 65 162 IPR006734 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02881 Trre-Chr5 22967412 22968909 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Trre5g02881 PLATZ 8.8e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02881 - - mtr:25482577 249.595