Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02870 ATGCGTCCACCGATGAAGAGAATCGATTATAATGTAGGAGATAAAGTAGAAGTATGTTGCAAAGAAGAAGGGTTTGTTGGATCATACTATGAAGCCACAATTGTTTCATGTCTTGATAATGGAAAATATGTTGTTTGTTACAAAAACCTTCTTAAAGATGATGAGTCTGGTCTTCTTACTGAGACATTATTTCCAAAGGATCTTCGTCCATTACCGCCACACGTTCGTAACCCTCCCAAGTTCCAACTCAATCAAAAAGTGGATGTTTTTGATAAAGATGGTTGGTGGGTAGGGAAAATTACAAGCGAAAAGATATCCATATGCAAAAGAGTTATTACTATAATGTGTATTTTGACTATACCGATCAAAATATTTACTACCCTTGTGATCAAATAA 396 0.351 MRPPMKRIDYNVGDKVEVCCKEEGFVGSYYEATIVSCLDNGKYVVCYKNLLKDDESGLLTETLFPKDLRPLPPHVRNPPKFQLNQKVDVFDKDGWWVGKITSEKISICKRVITIMCILTIPIKIFTTLVIK 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02870 131 SMART agenet_At_2 8 76 IPR014002 -
Trre5g02870 131 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 10 108 - -
Trre5g02870 131 CDD Tudor_Agenet_AtDUF_rpt1_3 12 73 - -
Trre5g02870 131 Gene3D - 4 73 - -
Trre5g02870 131 Pfam Agenet domain 13 73 IPR008395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02870 Trre-Chr5 22846938 22847333 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g02870 22 98 PHD Transcription Factor Family AT5G58610 35.052 1.92e-08 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02870 - - tpra:123923978 187.578