Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02856 ATGGCTCGTGAACAATTAGGAGTTCTTTCTGCTCTTGATGCAGCAAAAGTACAATGGTACCATTTCACAGCAATCATAGTTGCTGGTATGGGATTTTTCACCGATGCGTATGATCTTTTCTGCATACCAAATGTTACAAAATTACTTGGAAGAATATACTATACACACCCAAATTCACCAAAACCAGGAACTTTGCCTCCAAATGTATCAGCAGCAGTAAATGGTGTTGCACTTTGTGGAACTCTAGCAGGTCAACTTTTCTTTGGTTGGCTTGGGGACAAAATGGGAAGAAAAAAAGTTTATGGTCTAACTCTTGCTCTTATGGTATTTTCTTCTCTTGCTTCTGGCCTTTCTTTTGGTCATTCAGCAAAGGGTACAATATCAACACTTTGTTTCTTTAGATTCTGGCTTGGTTTTGGTATTGGTGGTGATTACCCTCTTTCAGCTACAATCATGTCTGAATATGCTAATAAAAAGACGCGTGGCGCGTTTATAGCTTCTGTTTTCGCCATGCAAGGGTTTGGAATTTTGGCTGGTGGAATTGTTTCTCTAGTTGTTTCAACTGCTTTTGATCATGCTTATAAGGCTCCACCTTATAATATTGATCCTGCAGGATCACTTGTACCAGAAGCTGATTATGTTTGGAGAATCATTCTCATGTTTGGTGCTGTTCCTGCCGCTTTGACTTACTATTGGCGTATGAAAATGCCCGAGACAGCAAGGTACACTGCCCTTGTTGCTAAGAATGCAAAACAAGCAGCGCAAGACATGTCAAATGTGTTACAAGTTGACATTGAAGCTGAACAAGAAAAAGTCGACAACATAACCGTGAGAGACCAGAACAACTTTGGTTTGTTTAGTAAGCAGTTTCTTAGAAGACACGGTCTTCATCTGCTTGGAACAACTTCCACTTGGTTTCTTCTCGATATTGCTTACTACAGTTCGAATCTTTTTCAAAAAGATATCTATAGTAGTATCGGTTGGCTTCCACCGGCCGCAGATATGAATGCGATTCACGAAGTTTTCAAGGTTGCTAGAGCGACGACGCTTATAGCACTTTGTGGAACTGTTCCAGGATACTGGTTCACCGTGGCTTTTATTGATGTAGTTGGCCGTTTTGCAATTCAATTAATGGGATTCTTCTTTATGACCGTGTTCATGTTTGCCCTCGCGCTTCCATATGATCATTGGACTAAGAAAGAAAACAGAGTTGGGTTTCTTGTTATGTACGCATTAACATTTTTCTTTGCAAATTTTGGACCAAATTCAACTACTTTTGTTGTGCCTGCCGAGATATTTCCGGCTAGGTTGAGGTCAACGTGTCACGGTATATCTTCGGCAGCAGGGAAAGCCGGAGCAATTATAGGTGCATTTGGATTCTTGTATGCTTCACAAAGTAAGGATCCAAAAAAGAGAGATGCAGGGTACCCTGCTGGTATTGGAATGAAGAACACACTTATTGTGCTAGCTGTGGTTAATTGTCTTGGTATCTTTTTCACGTTTCTTGTGCCGGAAGCTAACGGAAAATCCTTGGAAGAGATGAGTGGAGAGAATGAAGAAGATGAAGGTGAAGATGCTGTTGTTGTTGATCCACAAGTCCCTTCTAATAGGACTGTTCCAGTTTGA 1626 0.409 MAREQLGVLSALDAAKVQWYHFTAIIVAGMGFFTDAYDLFCIPNVTKLLGRIYYTHPNSPKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKMGRKKVYGLTLALMVFSSLASGLSFGHSAKGTISTLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIASVFAMQGFGILAGGIVSLVVSTAFDHAYKAPPYNIDPAGSLVPEADYVWRIILMFGAVPAALTYYWRMKMPETARYTALVAKNAKQAAQDMSNVLQVDIEAEQEKVDNITVRDQNNFGLFSKQFLRRHGLHLLGTTSTWFLLDIAYYSSNLFQKDIYSSIGWLPPAADMNAIHEVFKVARATTLIALCGTVPGYWFTVAFIDVVGRFAIQLMGFFFMTVFMFALALPYDHWTKKENRVGFLVMYALTFFFANFGPNSTTFVVPAEIFPARLRSTCHGISSAAGKAGAIIGAFGFLYASQSKDPKKRDAGYPAGIGMKNTLIVLAVVNCLGIFFTFLVPEANGKSLEEMSGENEEDEGEDAVVVDPQVPSNRTVPV 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02856 541 Gene3D MFS general substrate transporter like domains 20 531 IPR036259 -
Trre5g02856 541 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 21 506 - -
Trre5g02856 541 SUPERFAMILY MFS general substrate transporter 12 515 IPR036259 -
Trre5g02856 541 CDD MFS_PhT 25 505 - -
Trre5g02856 541 Pfam Sugar (and other) transporter 26 515 IPR005828 GO:0016020|GO:0022857|GO:0055085
Trre5g02856 541 FunFam Inorganic phosphate transporter 1-6 20 528 - -
Trre5g02856 541 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 508 IPR020846 GO:0022857
Trre5g02856 541 NCBIfam phosphate:H+ symporter 9 517 IPR004738 GO:0005315|GO:0006817|GO:0016020
Trre5g02856 541 MobiDBLite consensus disorder prediction 512 541 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02856 Trre-Chr5 22756286 22758191 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g02856 1 541 Inorganic Solute Cotransporters AT2G32830 76.384 0.0 869
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02856 K08176 - rcu:8285033 849.736