Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02798 ATGTCTAAGAATAACAATATCTTTTCATTTCTGATTAAGTTGGCTTTTTCTTTGATTAAAGGAAAAAGAAAGAGTTATGGCATTGCAATTTACAGTTCATTGATTAAGAAAGATAAAGATTTAGCTTTCTTGAAGAAAAAGAACAGTTTGGCTTTGTTGGAAATCATTGGAACAAGTGGATGGTGTGAGGTTTACAAAGCGGAATTACCGGGATGTAATGGTAAAATGATTGCTATTAAGAAGACACGACTAATTAAGTCGGGGATTGTTTTAGAAGAAATTAAGTCGGAGATTGACACGGTCGGTCATATTCGTCATTTGAACATTTTGCCACTTTTGGCTCATATTTCTAGACCTGATTGCCATTACCTTGTGTACGAGTTCATGAAGAATGGAAATCTGCAGGATATGTTGACCAAATTTGAAAGAGGTGAAGCGGAGTTGGATTGGTTGTCAAGGCATAAGATTGCGCTTGGTATCGCAACTGGTCTTGAATATCTTCATATGAGCCATAGTCCATGTATAATTCATCGAGATCTCAAGCCTGCAAATATTCTTCTTGATGATGATATGGAAGCTAGGATTGCAAATTTTGGACTTGCACTAGCGATGCCTGATGGGCAGACGCATATCAGTACTACATGCGTGGCTGGCACGGTGGGATATATAGCACCTGAGTATCATCAGATATTCACATGCAGTGACAAGTCTGACATTTATAGCTTTGGTGTTACGCTTGGTGTTTTGGTGATGGGAAAACTTCCTTCTGATGATTTTTTTCAGCACACAGACGAGATGAGTTTGGTCAGGTGGATGAGAAATATTATGGCTTCAGAAAATCCAAAGGATGCAATTGATGCAAGACTTATAGGTAATGGTTATGAGGAACAAATGCTTCAGGTATTAAAGATTGCCTGTTTTTGCACCATGGATAATCCTATGGAAAGGCCTAATAGTAAAAATGTTAGGATGATGTTATATCAAATTAAGCACTAG 996 0.3765 MSKNNNIFSFLIKLAFSLIKGKRKSYGIAIYSSLIKKDKDLAFLKKKNSLALLEIIGTSGWCEVYKAELPGCNGKMIAIKKTRLIKSGIVLEEIKSEIDTVGHIRHLNILPLLAHISRPDCHYLVYEFMKNGNLQDMLTKFERGEAELDWLSRHKIALGIATGLEYLHMSHSPCIIHRDLKPANILLDDDMEARIANFGLALAMPDGQTHISTTCVAGTVGYIAPEYHQIFTCSDKSDIYSFGVTLGVLVMGKLPSDDFFQHTDEMSLVRWMRNIMASENPKDAIDARLIGNGYEEQMLQVLKIACFCTMDNPMERPNSKNVRMMLYQIKH 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02798 331 SUPERFAMILY Protein kinase-like (PK-like) 33 329 IPR011009 -
Trre5g02798 331 Gene3D Transferase(Phosphotransferase) domain 1 129 331 - -
Trre5g02798 331 ProSiteProfiles Protein kinase domain profile. 50 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre5g02798 331 ProSitePatterns Serine/Threonine protein kinases active-site signature. 175 187 IPR008271 GO:0004672|GO:0006468
Trre5g02798 331 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 43 330 - -
Trre5g02798 331 FunFam Leucine-rich repeat receptor-like protein kinase 129 331 - -
Trre5g02798 331 Pfam Protein kinase domain 53 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre5g02798 331 Gene3D Phosphorylase Kinase; domain 1 41 128 - -
Trre5g02798 331 SMART serkin_6 50 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02798 Trre-Chr5 22270651 22271646 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g02798 7 331 Receptor kinase-like Gene Family AT2G31880 62.941 2.02e-155 448
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-2 Trre5g02798 Pkinase 1.3e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02798 - - gmx:100811980 470.7