Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02773 ATGGAAGCTCTATCCCTTTCCATTCCAATAATCCGTGTTACCAATACCAACTACATTTCTCTCAGTGCTGCTACTAACTATGCCTCACTCTCTTCCTTACACCACCGTTCTTCTTCTTCCTCAACCAGACCCTTCACCTTGAAGAAGACTGTTGTTCGTGTACAAGCTGAGAGTGAAGATTTTGAATTGAAGCAAGTCAGGGATATGGCTGCTGCCAAAAAGAGATGGGAAGCTCTGCTCAGGGATGAAAAAATTAAGGTTCTTACCCCAAAAGAAGCTGGTTATGCAGTACAGCTTTCAAACAAGCCCCTTCTTGATGTTCGTCCCTCAAATGAACACAGCAAGGCATGGGTGAAAGGTTCAACCTGGATTCCAATATTCGATGTTGATAATGGACTAGATGTTGGAACTATTCCCAGAAAAGTTACAAATTTCGCTATGGGAGGTTGGTGGAGTGGCATGCCTACACTGTCTTTTGACAACTCGTTCTTACCCAAAGTTGTGGAGAAGTTCCCCAAAGATGCAGAATTAATCGTTGCATGCCAGAAGGGACTGAGATCACTAGCTGCTTGTGAACTACTGTATAATGCTGGCTACAGTAACCTGTTCTGGGTTCAAGGAGGCTTCGAGGCTGCTGAAGAAGAGGATCTTGTAGTTGAGGGTCCAGTGCCTCTTAAGTTTGCTGGAATTGGCGGCATCTCAGAATTCCTTGGTTGGACTGATCAACAAAGAGCTGCTGCAGCCAAGGAAGGTTGGGGATACAGATTAGTGTTTTCTGCACGTCTGGTTGGACTATTTCTTGTTGCCGATGCATTATTTATTGGTGCTCAGCAAATTGGGCGCTATCTTCAGGAAATCAGGACCCATTGA 870 0.4483 MEALSLSIPIIRVTNTNYISLSAATNYASLSSLHHRSSSSSTRPFTLKKTVVRVQAESEDFELKQVRDMAAAKKRWEALLRDEKIKVLTPKEAGYAVQLSNKPLLDVRPSNEHSKAWVKGSTWIPIFDVDNGLDVGTIPRKVTNFAMGGWWSGMPTLSFDNSFLPKVVEKFPKDAELIVACQKGLRSLAACELLYNAGYSNLFWVQGGFEAAEEEDLVVEGPVPLKFAGIGGISEFLGWTDQQRAAAAKEGWGYRLVFSARLVGLFLVADALFIGAQQIGRYLQEIRTH 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02773 289 ProSiteProfiles Rhodanese domain profile. 98 221 IPR001763 -
Trre5g02773 289 SMART rhod_4 88 218 IPR001763 -
Trre5g02773 289 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 84 221 IPR036873 -
Trre5g02773 289 Gene3D - 85 254 IPR036873 -
Trre5g02773 289 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 11, CHLOROPLASTIC 15 287 IPR044664 -
Trre5g02773 289 CDD RHOD 104 211 - -
Trre5g02773 289 Pfam Rhodanese-like domain 94 211 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02773 Trre-Chr5 22096151 22099796 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g02773 1 289 Sulfurtransferasese or Rhodanese AT4G24750 66.327 3.21e-141 397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02773 - - tpra:123897303 538.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g02773 5 22096151 22099796 Trre5g02773 5 22096151 22099796 ECH