Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02772 ATGGCTATGCTCCAATGGCTAAAGGAAAGCTACAAACCATTCATGCTCTTTGCATTCATTTTCATGACTCTGTTAATAAAACTTATCTTTATAGACAAGTCAAGGAAGAGAAGATCTAATCTACCACCAGGTCCTTCTACTATACCCTTCATTGGAAATCTCCACCAGCTTGGCACCATGCCCCACTTATCTTTACAAAGCCTTACAGACAAGTATGGACCCTTGATTTTCTTACAACTTGGACAAATTCCAACAGTGGTGGTTTCATCAGCTAGACTAGCAAAGGAAGTGTTGAAAACACATGATCTTGCACTTGCAAGCCGACCACAACTGTTTTCAGCTAAATACCTCTTTTACAACTGCACAGACATCGTTTTTGCTCCTTATGATGCTTACTGGAGACATGTGAGAAAAATTTGCATACTTGAGCTTTTAAGTGCCAAAAGGGTAAACTCATATAGTGTTGTTAGAGAAGAAGAAGTCACGAATCTAGTTCATAGGATTGAAGTGTCTTATCCGGGAACTACCAATTTGTCTAAGATATTGGGATTGTATGCAAATAATGTTGTTTGCCGGATAGCGTTTGGAAGGGACTTCACAGAAGGAGGAGAGAGTAAAAAATATGGGTTTCAAAAGATGCTTGATGAGTATCAAGAACTCCTTGGAGGGTTCAGTGTTGGTGACTTCTTTCCTTCTTTGGAGTTCATACACAGCTTGACAGGTATGAAAGCAAGACTCGAAGATACTTCAAGAAAATTTGATCAACTCATTGATCAGATAGTGAATGAACACAAGGCTTGCAATAAGATAAAGGAGCATAAGGACCTTGTAGATATTTTACTTGAGGTGCAAATGAATGATTTGGGTGAATTGCCTCTAACCATCGATAATATCAAGGCAATAATCCTGGATATGTTTGCTGCTGGAACTGATACAACATTCATTACACTTGATTGGGCAATGACAGAATTGGTGATGAATCCCCGTGTTATGGAAAAAGCACAAAAGGAAGTGCGTAGCATCCTCGGAGAAAGAAGAGTTGTTGCAGAGAGTGATCTGCATCAACTGCAGTACATGAGGGCAGTCATTAAAGAGATATTTCGCCTGCATCCTGCAGTACCAGTATTAGTCCCAAGAGAATCCATGGAAGATATTACCTTAGAAGGGTACATAATTCCAGCTAAAACAAGATTTTTTGTCAATGCTTGGGCAATTGGTAGGAGTCCAGAAAGTTGGGAAGATCCCACTGCATTTAAACCAGAAAGATTTTTAGAGAGTAATGTTGATTACAAGGGGCAAGATTTCGAGTTAATACCTTTTGGGGCAGGTAGAAGAGGTTGTCCTGCTATTACATTTGCCATTGCAGTTGTTGAGCTTGCTCTAGCTCAACTCCTCTATAGCTTTGATTGGGAGCTTCCTCCTTCTGTTTCAGCAGAAGACTTGGATCTCACTGAAGTTTTTGGAATCTCAATGCACAGAAGAGAAAATCTTCTGGTTGTTGCGAAGCCATATACTTTCTATGAAGACTCATGA 1533 0.3986 MAMLQWLKESYKPFMLFAFIFMTLLIKLIFIDKSRKRRSNLPPGPSTIPFIGNLHQLGTMPHLSLQSLTDKYGPLIFLQLGQIPTVVVSSARLAKEVLKTHDLALASRPQLFSAKYLFYNCTDIVFAPYDAYWRHVRKICILELLSAKRVNSYSVVREEEVTNLVHRIEVSYPGTTNLSKILGLYANNVVCRIAFGRDFTEGGESKKYGFQKMLDEYQELLGGFSVGDFFPSLEFIHSLTGMKARLEDTSRKFDQLIDQIVNEHKACNKIKEHKDLVDILLEVQMNDLGELPLTIDNIKAIILDMFAAGTDTTFITLDWAMTELVMNPRVMEKAQKEVRSILGERRVVAESDLHQLQYMRAVIKEIFRLHPAVPVLVPRESMEDITLEGYIIPAKTRFFVNAWAIGRSPESWEDPTAFKPERFLESNVDYKGQDFELIPFGAGRRGCPAITFAIAVVELALAQLLYSFDWELPPSVSAEDLDLTEVFGISMHRRENLLVVAKPYTFYEDS 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02772 510 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g02772 510 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g02772 510 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g02772 510 Gene3D Cytochrome P450 27 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g02772 510 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 440 449 IPR017972 GO:0005506|GO:0016705
Trre5g02772 510 SUPERFAMILY Cytochrome P450 42 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g02772 510 CDD CYP71-like 71 497 - -
Trre5g02772 510 Pfam Cytochrome P450 42 496 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g02772 510 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g02772 510 PRINTS E-class P450 group I signature 185 203 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g02772 510 PRINTS E-class P450 group I signature 360 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g02772 510 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g02772 510 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g02772 510 PRINTS E-class P450 group I signature 401 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g02772 510 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g02772 510 PRINTS E-class P450 group I signature 93 114 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g02772 510 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g02772 510 PANTHER CYTOCHROME P450 71B11-RELATED 24 502 - -
Trre5g02772 510 FunFam Cytochrome P450 99A2 31 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02772 Trre-Chr5 22093393 22095015 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g02772 16 500 Cytochrome P450 AT3G26300 44.694 8.32e-153 444
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02772 - - lang:109326078 808.52