Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02770 ATGTTGGAAGGAAAGATGTTTCAATATCTACCAACATATATAAAGCAAGTGTCTCACGACCTAAACACTACCCTTGTCACGTTTCTTTCTTTCTTCATCAGCATACTGCTGGTGTTCAAGTTCGCTAGAATAAACAAAATAAATCTACCACCATCCCCACCTAGATTGCCAATAATTGGAAATTACCTTCAACTAGGAACACTTCCTCATCGTTCTTTTCAATCTCTCTCACAAAAGTATGGTCCTCTAATGCTGTTACATCTTGGTCAGCTTCGTGTGTTGGTGGTTTCCTCAGTAGATATGGCTAAGGAAGTCATGCAAACACACGACACGGTTTTTGCGAGCCGACCATGTCTGACATCTACAAAAGCCTTACTCTATGGATGTAAGGACATAGCATTTGCATGTTATGGTGATACATGGAGACAGAAAAAGAAACTGTGTGTGATTGAATTGTTGAGTCAGAAAAGGGTTCAATCGGTACAGTTTATTAGAGAAGAGGAAGCTGTGGCATTGGTTGATAAAATCCGTAAAGCAACGATTTTGAGTGATGGTTGTTGCACTGTGAACCTTAGTGAGATGATCATTGCAACCGCAAACAACATAATCAGTAGGTGTATATTTGGAAAGAAATATGATGGTGATGGTTGCAGATTTGGAAAGCTTGGAAGGAAGATAATGACTCAAGTTTCAGATTTAAGTATTGGAGATATGTTTCCTTTGTTGGGTTGGGTTGATGTTCTCACTGGCCAAATTAAAAAATTTAAGGCTACTTTTGAAGAAATGAATGATTTCTTTGATGGTGTAATTATAGAGCATAAAATGTCTAGTAGGGACCCCAACAAGAAAGATTTCCTCGACATTCTGCTTCAACTTCAGAATGATGGTCTTTCAGAGTTCAACCTTACACAAAATGACTTAAAAGCACTCTTAATGGACATGTTTTTAGGAGGAAGTGATACAACTTCAACAACAGTAGAGTGGGCAATGGCGGAGCTCGCAAAAAATCCAGCCATAATGAAGAAAGCACAGGAAGAGGTAAGGAGAATTGTAGGCGATAAATCAAAAATAGAGGACAGTGATATCGATCAAATGAACTACTTGAAATGTGTAATCAAAGAAACTTTGAGGATGCATCCAGCTGCTCCTCTTTTGGCTCCTAGAGAAACAACATCATGTGTTAAACTCAGAGGATATGATATTCCTGATAAAACTTTGGTATATGTCAACGCATGGGCAATCCAGAGGGACCCTGAATTTTGGGAAAGGCCAGAAGAATTTCTACCTGAGAGATTTGAGAACAACAAGGTTAATTTCAATGGTCAAGATTTTCAGTTTATCCCGTTTGGTTCTGGGAGAAGAAAATGCCCTGGTGTGGCGTTTGGGCTTGCTTCAACCGAGTATATGGTTGCTAATCTTTTGTATTGGTTTGACTGGAAGATACCTACAAATGGTTCATCTCTTCAAGACATAGACATGACTGAGAAATTTGGAATCACCGTCAACAAGAAAGTTCCTCTGTGTTTCCAACCGATACCATACAATAATTTCGTAGAATAA 1560 0.3878 MLEGKMFQYLPTYIKQVSHDLNTTLVTFLSFFISILLVFKFARINKINLPPSPPRLPIIGNYLQLGTLPHRSFQSLSQKYGPLMLLHLGQLRVLVVSSVDMAKEVMQTHDTVFASRPCLTSTKALLYGCKDIAFACYGDTWRQKKKLCVIELLSQKRVQSVQFIREEEAVALVDKIRKATILSDGCCTVNLSEMIIATANNIISRCIFGKKYDGDGCRFGKLGRKIMTQVSDLSIGDMFPLLGWVDVLTGQIKKFKATFEEMNDFFDGVIIEHKMSSRDPNKKDFLDILLQLQNDGLSEFNLTQNDLKALLMDMFLGGSDTTSTTVEWAMAELAKNPAIMKKAQEEVRRIVGDKSKIEDSDIDQMNYLKCVIKETLRMHPAAPLLAPRETTSCVKLRGYDIPDKTLVYVNAWAIQRDPEFWERPEEFLPERFENNKVNFNGQDFQFIPFGSGRRKCPGVAFGLASTEYMVANLLYWFDWKIPTNGSSLQDIDMTEKFGITVNKKVPLCFQPIPYNNFVE 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02770 519 PRINTS E-class P450 group I signature 326 352 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g02770 519 PRINTS E-class P450 group I signature 306 323 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g02770 519 PRINTS E-class P450 group I signature 446 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g02770 519 PRINTS E-class P450 group I signature 198 216 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g02770 519 PRINTS E-class P450 group I signature 77 96 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g02770 519 PRINTS E-class P450 group I signature 101 122 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g02770 519 PRINTS E-class P450 group I signature 369 387 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g02770 519 PRINTS E-class P450 group I signature 410 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g02770 519 PRINTS E-class P450 group I signature 456 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g02770 519 CDD CYP71-like 79 507 - -
Trre5g02770 519 FunFam Cytochrome P450 83B1 37 510 - -
Trre5g02770 519 PANTHER CYTOCHROME P450 71B11-RELATED 37 512 - -
Trre5g02770 519 PRINTS P450 superfamily signature 317 334 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g02770 519 PRINTS P450 superfamily signature 370 381 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g02770 519 PRINTS P450 superfamily signature 447 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g02770 519 Pfam Cytochrome P450 50 496 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g02770 519 Gene3D Cytochrome P450 38 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g02770 519 SUPERFAMILY Cytochrome P450 50 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g02770 519 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 449 458 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02770 Trre-Chr5 22081994 22083810 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g02770 30 512 Cytochrome P450 AT5G25180 42.331 9.47e-140 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02770 K20617 - cave:132175480 581.252