Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02663 ATGGCAGCACGCAGAATTTTCACCTTGGTTTCTCGCTCTCAATGTCTCCCTCGGTTTCCTACTTCTCTACTTCATATATTAGGAAGAGACACCCAAAGAGGAAGAAACATAAGCAAATTTAGCACTGCTGCAGAAGTTGATGAATTAATCACACCATCTGTGAAAATAAGATACACAAAGAATCTCATAAATGGAGAATTTGTGGATCCTGTATCAGGAAAAACTTTTCCTGCCTATGATCCACGAAGTGGGGAAGTGATTGCTTATGTTGCTGAAGGTGATCAAGAAGATATCAACCGTGCAGTATTTGCAGCTAGAAAAGCTTTTGATGAAGGGCCTTGGCCAAAGATGAGCCCTTATATATTCTTACCCCTGCAGGAAAGATCACGGATACTATTGCACGTCGCTGATTTGGTTGAAAAACATAGTGATGAACTTGCAGCATTGGAAACATGGAACAATGGCAAGCTTTATGAACAATCTGCAAATATTGAAGTACCTATGTTTGTACGTATGCTTCACTACTATGCTGGTTGGGCAGATAAAATTCATGGTCTAATACCTTTAACTGCTTTATTAGCAGCACACCTATTTCAAGAGGGTCAATGTTGCTGTGCTGGGTCGCGTACTTATGTTCACCAGCGAATATATGACGAGTTCTTGGAGAAAGCCAAGGCAGCAGCTTTGAAACGTGTTGTCGGCGATCCATTCAAAAAAGGTGTAGACCAAGGCCCTCAGATTGATTCACAACAACAGTTTGAGAAAATCCTCCATTACATCAGGCCAGGTGTTGAAAGTAATGCTACTCTAGAATGTGGTGGTAACAGAATTGGCACAAAAGGCTTCTTTGTCCAACCAACAGTCTTCTCAAATGTTCAAGATGACATGAAAATAGCTAAGGATGAGATATTCGGGCCTGTTCAAACCATATTGAAATTCAAAGACAATGATGAAGTAATAAGAAGGGCAAATAATACACGTTATGGTCTAGCTGCTGGCGTATTCACAAAGAATTTGGACACAGCAAATACATTGATGAGAGGATTAAGGGCAGGAACGGTGTGGATTAATTGCTTTGGTGGGTACAAGATGAGTGGTGTAGGAAGGGAGAAAGGTATCTATAGTCTTCATGATTACTTGCAAGTTAAGGCTGTGGTTGCACCTCTTAAGAATCCCGCATGGTTGTAA 1188 0.4091 MAARRIFTLVSRSQCLPRFPTSLLHILGRDTQRGRNISKFSTAAEVDELITPSVKIRYTKNLINGEFVDPVSGKTFPAYDPRSGEVIAYVAEGDQEDINRAVFAARKAFDEGPWPKMSPYIFLPLQERSRILLHVADLVEKHSDELAALETWNNGKLYEQSANIEVPMFVRMLHYYAGWADKIHGLIPLTALLAAHLFQEGQCCCAGSRTYVHQRIYDEFLEKAKAAALKRVVGDPFKKGVDQGPQIDSQQQFEKILHYIRPGVESNATLECGGNRIGTKGFFVQPTVFSNVQDDMKIAKDEIFGPVQTILKFKDNDEVIRRANNTRYGLAAGVFTKNLDTANTLMRGLRAGTVWINCFGGYKMSGVGREKGIYSLHDYLQVKAVVAPLKNPAWL 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02663 395 SUPERFAMILY ALDH-like 52 391 IPR016161 GO:0016491
Trre5g02663 395 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 193 385 - -
Trre5g02663 395 FunFam Aldehyde dehydrogenase, putative 358 383 - -
Trre5g02663 395 FunFam Mitochondrial aldehyde dehydrogenase 2 189 365 - -
Trre5g02663 395 Pfam Aldehyde dehydrogenase family 68 185 IPR015590 GO:0016491
Trre5g02663 395 Pfam Aldehyde dehydrogenase family 191 385 IPR015590 GO:0016491
Trre5g02663 395 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 359 385 IPR016162 GO:0016491
Trre5g02663 395 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 63 185 IPR016162 GO:0016491
Trre5g02663 395 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 191 358 IPR016163 GO:0016620
Trre5g02663 395 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 197 208 IPR016160 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02663 Trre-Chr5 20880568 20884129 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g02663 195 395 Aldehyde Dehydrogenase Gene Family AT3G48000 70.952 1.60e-107 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02663 K00128 - tcc:18603880 337.806