Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02653 ATGCATAAACTTGAACCACCTGATCAGAATTTCGCATGGGGTTGGAATCTCACATCAGATCCGTGCACTCATAACTGGCACGGTGTAACTTGCTCCGCAAACAACCAATACATTAAGAGCATAGTTCTTGAAGAACTTAATCTCACCGGTGTTCTAGACGCGACTTCTCTTTGCATTTCTACATCTCTTCAATTCGTCAGCCTCAACAATAACAATTTACGCGGTTTTATATCAGAGGATATAAGAAACTGCAAGTTCTTGACACACTTGCTTCTTAGTGGTAACGAATTCTCTGGCAATCTTCCTGTTTCCATTTCTCAACTACGCAACATGAAGCGCCTTCATGTTTCCGACAATCGCTTCACCGGAAACCTTCCTAATATGGTTAATGTTACAAGCTTGATATCATTTCTTGCACAAAACAACAAATTCACCGGTCAAATTCCTGATTTCGATTTCTCAAATTTTGAAGCCTTTAATGTCTCTAACAACGATTTACGCGGTCCTGTTCCAGACGTTAGAGGTAGATTTGGTGCTGACAGTTTTTATGGTAATCCTAATCTATGTGGAAAACCAATTTCAAACTCTTCATGTCCACCACCGCCACCACCTCCTCCTCCAATTGCTAACAAAGACAAAATCATAAATCAATTTCTTGATGATTTACCGATTTATTCAGGTTACATAGTTATTGGTTTAATTTTATTGATTTTCTTGATCTTCAAGTTGTTAAGGAAATGCAAGACGAAAGATAAAGAAAAAGGATTAGATCATGTTGAAAAGAAGGACATGTCACAAGACAATAGTGTTGTTGTTGGAGGTGGTGAAAAGCTTAGTGAGATACTTAATTCCAATGGATCAAAGAATTGGTTTAATGGCCTTGGGATGAAATCAGAGTATTCTATGACATCTATGGAAAGTGGAGTGACTACATCAGGTCTTGTTCTTCTTTCTAGTAGAAAGCTAAGGGGATTGCAATTTGAGGATTTGTTAAGTGCTCCTGCTGAATTGATTAAGAGAGGAAAACATGGAAGCTTATACAAGGTTATGTTAGATAATGGTGTGCTTTTGGCTGTTAAGAGGATCAAGGATTGGGGAATTTCAAAGCATGATTTTGAGAGAAGGATGAATTTGATAGCTCAAGTAAAGCATCCTCTTGTAATGTCACCTGTTGCATACTATTGTTCTCAGCAAGAGAAGCTTCTGGCTTATGAATATCTTCCAAATGGTAGCCTCTTCATGTTGCTCTATGGATCTCAAAGCGGACATTCGCTTGACTGGAGGAGTAGACTAGACGTTGCCACTAAAATAGCTGAAGCTTTGGCGTATATGCACGAGGAGCTTGGTGAGAGTGGAATAGCACACGGCAATTTAAAATCAAGTAACATTCTGTTTGACAAGAATATGAATCCACAAATAAGCGAATATGGCCTAATGGTTTCTCATAAAAAAAGCATAAAAAACAGAAATATGTCTGCAGCCATATTCAGAGCAGATATATACGCATTTGGTGTGATACTTCTGGAACTCCTGACAGGGAAAGTGGTTAAAAACGATGGATTCGATTTGGTTAAATGGGTGAATTCAGTGATCAGTGAAGAATGGACTGCAGAAGTTTTTGACAGGTACCTAATCTCACAAGGTGCTTCTGAAGAGAGGATGGTGAACTTGTTGCAGGTGGCATTGAAATGCACAAATCCTTCTCCAAATGACAAGCTAAGTATGAGTCAAGTGGCACTCATCACAAATGCATTGAAAGATGAAGATGACAAATCCATATCCTTTAACACATAG 1794 0.3863 MHKLEPPDQNFAWGWNLTSDPCTHNWHGVTCSANNQYIKSIVLEELNLTGVLDATSLCISTSLQFVSLNNNNLRGFISEDIRNCKFLTHLLLSGNEFSGNLPVSISQLRNMKRLHVSDNRFTGNLPNMVNVTSLISFLAQNNKFTGQIPDFDFSNFEAFNVSNNDLRGPVPDVRGRFGADSFYGNPNLCGKPISNSSCPPPPPPPPPIANKDKIINQFLDDLPIYSGYIVIGLILLIFLIFKLLRKCKTKDKEKGLDHVEKKDMSQDNSVVVGGGEKLSEILNSNGSKNWFNGLGMKSEYSMTSMESGVTTSGLVLLSSRKLRGLQFEDLLSAPAELIKRGKHGSLYKVMLDNGVLLAVKRIKDWGISKHDFERRMNLIAQVKHPLVMSPVAYYCSQQEKLLAYEYLPNGSLFMLLYGSQSGHSLDWRSRLDVATKIAEALAYMHEELGESGIAHGNLKSSNILFDKNMNPQISEYGLMVSHKKSIKNRNMSAAIFRADIYAFGVILLELLTGKVVKNDGFDLVKWVNSVISEEWTAEVFDRYLISQGASEERMVNLLQVALKCTNPSPNDKLSMSQVALITNALKDEDDKSISFNT 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02653 597 Gene3D Phosphorylase Kinase; domain 1 303 406 - -
Trre5g02653 597 SUPERFAMILY Protein kinase-like (PK-like) 336 579 IPR011009 -
Trre5g02653 597 Gene3D Transferase(Phosphotransferase) domain 1 407 596 - -
Trre5g02653 597 ProSiteProfiles Protein kinase domain profile. 332 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre5g02653 597 PANTHER OS05G0588300 PROTEIN 11 586 - -
Trre5g02653 597 SUPERFAMILY L domain-like 11 175 - -
Trre5g02653 597 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 54 148 - -
Trre5g02653 597 Gene3D Ribonuclease Inhibitor 2 173 IPR032675 -
Trre5g02653 597 Pfam Protein kinase domain 338 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02653 Trre-Chr5 20819284 20821963 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g02653 10 588 Receptor kinase-like Gene Family AT2G36570 34.277 4.10e-95 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Trre5g02653 Pkinase 3.6e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02653 - - pvu:PHAVU_009G180700g 778.089