Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02633 ATGGCTACCGCCGGTGATGTTCTCAGACAGAGTTTACCAGAAGTGGGTGTTGGTGAGTTACATGTGCTTGCTGTGGATGATAGTTTTGTTGATCGTAAAGTTATTGAAAGGTTGCTCAAATTCACTTCTTGCAAAGTGACTGTGGTAGAGAGTGGAACTAGAGCTTTACAGTATCTGGGGTTGGATGGTGACACCAGTTCAATTGGTTTTGATGGTGTGAAGGTTAATATGATAATGACAGATTATTCCATGCCTGGGATGACAGGATATGAACTACTCAAGAAGATTAAGCAGGAATCATCTGTTTTTAGAGAAATTCCAGTGGTGGTTATGTCCTCTGAGAATATCTTAACCCGAATCGATAGTTGTTTAGAGGAAGGAGCAGAGGAGTTTCTATTGAAACCTGTCAAGTTATCCGACGTGAAACGGTTAACAGATTTCATCATGAGCGGTGAAGGGAAGAAAGTTGGAGGAAAAAGATCTCAAAAAAGAAACCGATCAGATGATTGCATTTCTTCTCTATCAACGGTATCTCATCCATGCGATCTATCATCACTATCACCGTCTGCAATGTCATCAAAAAAATCTAGACTATGA 597 0.4037 MATAGDVLRQSLPEVGVGELHVLAVDDSFVDRKVIERLLKFTSCKVTVVESGTRALQYLGLDGDTSSIGFDGVKVNMIMTDYSMPGMTGYELLKKIKQESSVFREIPVVVMSSENILTRIDSCLEEGAEEFLLKPVKLSDVKRLTDFIMSGEGKKVGGKRSQKRNRSDDCISSLSTVSHPCDLSSLSPSAMSSKKSRL 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02633 198 ProSiteProfiles Response regulatory domain profile. 21 149 IPR001789 GO:0000160
Trre5g02633 198 PANTHER TWO-COMPONENT RESPONSE REGULATOR 20 161 IPR045279 GO:0009736
Trre5g02633 198 CDD REC_typeA_ARR 22 144 - -
Trre5g02633 198 MobiDBLite consensus disorder prediction 168 198 - -
Trre5g02633 198 Gene3D - 20 175 - -
Trre5g02633 198 MobiDBLite consensus disorder prediction 153 198 - -
Trre5g02633 198 SUPERFAMILY CheY-like 19 147 IPR011006 -
Trre5g02633 198 Pfam Response regulator receiver domain 22 142 IPR001789 GO:0000160
Trre5g02633 198 SMART REC_2 20 145 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02633 Trre-Chr5 20632637 20634672 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g02633 20 174 Response Regulator Gene Family AT3G48100 69.872 2.28e-73 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Trre5g02633 Response_reg 2.9e-19 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02633 K14492 - gmx:100306152 288.115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g02633 5 20632637 20634672 Trre5g02633 5 20632637 20634672 ECH