Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02632 ATGGCTACCGCCGGTGATGTTCTCAGACAGAGTTTACCAGAAGTGGGTGTTGGTGAGTTACATGTGCTTGCTGTGGATGATAGTTTTGTTGATCGTAAAGTTATTGAAAGGTTGCTCAAATTCACTTCTTGCAAAGTGACTGTGGTAGAGAGTGGAACTAGAGCTTTACAGTATCTGGGGTTGGATGGTGACACCAGTTCAATTGGTTTTGATGGTGTGAAGGTTAATATGATAATGACAGATTATTCCATGCCTGGGATGACAGGATATGAACTACTCAAGAAGATTAAGGAATCATCTGTTTTTAGAGAAATTCCAGTGGTGGTTATGTCCTCTGAGAATATCTTAACCCGAATCGATAGTTGTTTAGAGGAAGGAGCAGAGGAGTTTCTATTGAAACCTGTCAAGTTATCCGACGTGAAACGGTTAACAGATTTCATCATGAGCGGTGAAGGGAAGAAAGTTGGAGGAAAAAGATCTCAAAAAAGAAACCGATCAGATGATTGCATTTCTTCTCTATCAACGGTATCTCATCCATGCGATCTATCATCACTATCACCGTCTGCAATGTCATCAAAAAAATCTAGACTATGA 594 0.4024 MATAGDVLRQSLPEVGVGELHVLAVDDSFVDRKVIERLLKFTSCKVTVVESGTRALQYLGLDGDTSSIGFDGVKVNMIMTDYSMPGMTGYELLKKIKESSVFREIPVVVMSSENILTRIDSCLEEGAEEFLLKPVKLSDVKRLTDFIMSGEGKKVGGKRSQKRNRSDDCISSLSTVSHPCDLSSLSPSAMSSKKSRL 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02632 197 Pfam Response regulator receiver domain 22 141 IPR001789 GO:0000160
Trre5g02632 197 CDD REC_typeA_ARR 22 143 - -
Trre5g02632 197 PANTHER TWO-COMPONENT RESPONSE REGULATOR 20 160 IPR045279 GO:0009736
Trre5g02632 197 SUPERFAMILY CheY-like 19 146 IPR011006 -
Trre5g02632 197 MobiDBLite consensus disorder prediction 167 197 - -
Trre5g02632 197 ProSiteProfiles Response regulatory domain profile. 21 148 IPR001789 GO:0000160
Trre5g02632 197 Gene3D - 20 174 - -
Trre5g02632 197 SMART REC_2 20 144 IPR001789 GO:0000160
Trre5g02632 197 MobiDBLite consensus disorder prediction 152 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02632 Trre-Chr5 20632637 20634672 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g02632 20 173 Response Regulator Gene Family AT3G48100 70.323 3.65e-75 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Trre5g02632 Response_reg 3.7e-19 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02632 K14492 - gmx:100819165 292.737