Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02631 ATGAACCATTATGAAGATATAAAAAGATTTGGTAGTAATGTGAAAGGACTAATTGTTGAAGAAAATGGTCTTGATGTTATTTATATGATGGATAAAGAAAGTAGACAAATGATATCTAGATTTCCAAATTGTATGTTCAATCCTAGTTTTGAAGAAGATGAAGAAGAAAAAGAAAAGATAATAGATGTTTTGGTTCATAGGTCTAAAGTATCTAATCCTCATGAGATTCCATTTGCATGTGAAACTCCACTTCCACTTCCACCACTACAAAAATCTTCATCAATGAATCTTGAGAAGAAGATTCACATGAGTTATTACAATCAATCACTACCTTCTCCTCCTCGTTCTCCTCCTCCTCCTCCACCTCCACCACCACCACCGGCTCCTCTAAAGAAAGAAATTCCAAAGGCGCCACTTCGTCCACCGCTACTACCTTGTCCACCTCCACTTCCAAAGTCTAACGGCTTTATTTCATCCATGAAACCACCAGCAGCACCTAAAGGGAAAGGAAATATGAAAGAGGGTATTATAGGAGAGAGTTCAAGAGATAAAGGTGGTGGCCAAACAAGGCTAAAGCCTTTACATTGGGATAAGGTTGCAGCTGATGTTGATCATTCAACTGTGTGGGATCAGATCAATGATGGATCTTTTAGGTTTGATGATGAACTCATGGAATCACTCTTTGGATATTCAAACACCTATCATAAAACCCAAGAAAGAAACAAGTCTCTTTTCACTTTGGCCAAGTCCAATTCCAACACACAAACTCAAATATTCATCCTTGAGCCAAGAAAATCTCAAAACACTGCAATTGTACTGAGATCACTAGCAGTTTCTCGGCGCGAAATCTTGGATGCAGTACTTGATGGTCAAGGACTCAGTGTTGAGACACTTGAAAAACTCACTAAAATAGCTCCCTCTCAAGAAGAAGCATCCAAAATTGTCCAATTCATCGGCAACCCGAATAACCTTGCAGAAGCTGAGTCTTTCCTATACTACATCCTTAAAGCTGTTCCAACATCGTTCAACCATTTGAAAGCAATGCTTTTCAGATCGAATTACGATAGTGAAATTCTTCGGCTTAAGGAACACTTACAAACACTTGACTTGGGTTGCAAGGAACTGAAAACTAGTAGTCTATTCTTGAAACTCCTTGAGGCAATTCTCAAAACTGGTAACAGAATGAATGCTGGAACTTCAAGAGGGAATGCACAAGGTTTCAACTTGAGTGCTCTTACAAAACTTTCTGATGTAAAAAGCACAAATGGAAAAACTAGTTTACTTCACTTCATAGTTGAACAAGTAGTTCATTCAGAAGGGAAAAGAAAATCTATCTATGAAAAACAAAATGATGAAAGTGAAAAAGAATATGTAATTCTTGGTTTACAAGTGCTAAGTGGTCTAAGTAATGAGTTATCAGAAGCAAAAAAAGCAGCTAGCATGCACTATAACAGTTTCATCACTATGTGTTCAACTCTTAGTTCTCATGTTAATGAAATTAAACACATTATAACATGCTGTGGAAACACTAAAGGTGGATTTATCAATGAGATGAAAGGGTTTCTAGAGTTATGTGAGGAAGAACTTAAAGTGGTGAAAGAGGAACAAACAAGGATCATGGAACTTGTGAAGAAAACAAATGAGTACTATCTAGCAGGAACATCTAAAGACAATATGTCTAATCCTTTTCATTTGTTTGTTATTGTAAAAGATTTTGTTGACAAGGTTGGTCAAACTTGTATTGAACTAAAAAAGAAGGTAGAAAAGAAGAATGTAGGAGTGGAATCTATATCAACACCACCACCTTTGTCTCCATCAAAGAAGGTGCCACTGAGATTTCATAACATTGATTTAAATTTTCTGTCAAATAAGTTAGCGTTAGAGTCTACATTTTCCAGTCAGTCAGAAGATGACTTCTGA 1920 0.3667 MNHYEDIKRFGSNVKGLIVEENGLDVIYMMDKESRQMISRFPNCMFNPSFEEDEEEKEKIIDVLVHRSKVSNPHEIPFACETPLPLPPLQKSSSMNLEKKIHMSYYNQSLPSPPRSPPPPPPPPPPPAPLKKEIPKAPLRPPLLPCPPPLPKSNGFISSMKPPAAPKGKGNMKEGIIGESSRDKGGGQTRLKPLHWDKVAADVDHSTVWDQINDGSFRFDDELMESLFGYSNTYHKTQERNKSLFTLAKSNSNTQTQIFILEPRKSQNTAIVLRSLAVSRREILDAVLDGQGLSVETLEKLTKIAPSQEEASKIVQFIGNPNNLAEAESFLYYILKAVPTSFNHLKAMLFRSNYDSEILRLKEHLQTLDLGCKELKTSSLFLKLLEAILKTGNRMNAGTSRGNAQGFNLSALTKLSDVKSTNGKTSLLHFIVEQVVHSEGKRKSIYEKQNDESEKEYVILGLQVLSGLSNELSEAKKAASMHYNSFITMCSTLSSHVNEIKHIITCCGNTKGGFINEMKGFLELCEEELKVVKEEQTRIMELVKKTNEYYLAGTSKDNMSNPFHLFVIVKDFVDKVGQTCIELKKKVEKKNVGVESISTPPPLSPSKKVPLRFHNIDLNFLSNKLALESTFSSQSEDDF 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02631 639 Pfam Formin Homology 2 Domain 188 575 IPR015425 -
Trre5g02631 639 SMART it6_source 181 591 IPR015425 -
Trre5g02631 639 MobiDBLite consensus disorder prediction 111 152 - -
Trre5g02631 639 PANTHER FORMIN-RELATED 75 591 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Trre5g02631 639 Gene3D Formin, FH2 domain 204 595 IPR042201 -
Trre5g02631 639 MobiDBLite consensus disorder prediction 107 189 - -
Trre5g02631 639 ProSiteProfiles Formin homology-2 (FH2) domain profile. 181 602 IPR015425 -
Trre5g02631 639 SUPERFAMILY Formin homology 2 domain (FH2 domain) 117 590 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02631 Trre-Chr5 20627038 20629588 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g02631 5 624 FH2 protein (formin) Gene Family AT1G70140 42.813 1.64e-143 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02631 - - tpra:123885767 1105.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g02631 5 20627038 20629588 Trre5g02631 5 20627038 20629588 ECH