Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02575 ATGGATTTTCAGAGGGTAGAGGTCATAAGCATGGCAGTAGCTCTTGTTGCCATTGTTGGTGGCACCGCTTACTATTACTATCTCACCAAGAAACCTAAAGGGTGTTTGGATCCTGAGAATTTCAAGGAATTTAAGCTTGTCAAACGCACTCAACTCAGTCATAATGTTGCCACATTCAGATTTGACCTTCCGAGTTCTAGTTCCGTGTTGGGACTTCCTATCGGACAGCATATCATCTGCAGAGGGAAAGATAGTCTTGGCGAAGAAGTAATCAAACCATATACTCCAACAACATTGGATACTGATGTTGGATACTTTGAATTGGTTGTTAAGATGTATCCACAAGGAAGAATGTCTCATCACTTCAGTGAGATGCGCGAAGGTGATTACTTAGCTGTGAAAGGACCAAAGGGACGTTTTAAGTACCAACCGAATGAAGTAAAAGCTTTTGGAATGATTGCTGGTGGCACTGGCATCACTCCAATGTTTCAGGTTGCAAGAGCTATACTAGAAAATCCACAGGACAAAACCGACGTAAATTTGATATATGCCAATGTCACATATGATGACATTCTTTTAAAGGAAGAGCTGGATGACTTGGCAATTAAGTTCCCAAACCGATTTAAAGTTTATTATGTTCTAAATCAGCCACCAGAAATATGGAACGGTGGAGTTGGATTTGTATCCAAGGAAATGATCCAAGCACATTTACCTGAACCAGCATCTGATATTAAGATACTAAGGTGTGGACCACCTCCCATGAACAAGGCTATGGCTGCTAACCTTGAAGCTCTTGGATACAGTCCTCAAATGCAGTTTCAGTTTTAG 828 0.4106 MDFQRVEVISMAVALVAIVGGTAYYYYLTKKPKGCLDPENFKEFKLVKRTQLSHNVATFRFDLPSSSSVLGLPIGQHIICRGKDSLGEEVIKPYTPTTLDTDVGYFELVVKMYPQGRMSHHFSEMREGDYLAVKGPKGRFKYQPNEVKAFGMIAGGTGITPMFQVARAILENPQDKTDVNLIYANVTYDDILLKEELDDLAIKFPNRFKVYYVLNQPPEIWNGGVGFVSKEMIQAHLPEPASDIKILRCGPPPMNKAMAANLEALGYSPQMQFQF 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02575 275 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 39 143 IPR017927 GO:0016491
Trre5g02575 275 FunFam NADH-cytochrome b5 reductase 34 133 - -
Trre5g02575 275 CDD cyt_b5_reduct_like 44 275 - -
Trre5g02575 275 Pfam Oxidoreductase FAD-binding domain 44 142 IPR008333 -
Trre5g02575 275 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 151 170 IPR001709 GO:0016491
Trre5g02575 275 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 189 200 IPR001709 GO:0016491
Trre5g02575 275 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 245 253 IPR001709 GO:0016491
Trre5g02575 275 Gene3D Translation factors 32 131 - -
Trre5g02575 275 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 131 270 IPR039261 -
Trre5g02575 275 Pfam Oxidoreductase NAD-binding domain 152 258 IPR001433 GO:0016491
Trre5g02575 275 PANTHER NADH-CYTOCHROME B5 REDUCTASE 31 275 IPR001834 GO:0016491
Trre5g02575 275 PRINTS Cytochrome B5 reductase signature 92 99 - -
Trre5g02575 275 PRINTS Cytochrome B5 reductase signature 189 200 - -
Trre5g02575 275 PRINTS Cytochrome B5 reductase signature 70 81 - -
Trre5g02575 275 PRINTS Cytochrome B5 reductase signature 128 142 - -
Trre5g02575 275 PRINTS Cytochrome B5 reductase signature 151 170 - -
Trre5g02575 275 PRINTS Cytochrome B5 reductase signature 245 253 - -
Trre5g02575 275 Gene3D - 132 275 IPR039261 -
Trre5g02575 275 FunFam NADH-cytochrome b5 reductase 133 275 - -
Trre5g02575 275 SUPERFAMILY Riboflavin synthase domain-like 32 145 IPR017938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02575 Trre-Chr5 20173291 20176163 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g02575 24 275 NADPH P450 reductases AT5G17770 80.159 1.96e-156 435
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02575 K00326 - gmx:100812559 503.056