Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02573 ATGAAGAAGGTTTCTCTTTATGCTTGTTTATTACTCAACTTGAGTTTTTTAGTTATTTTTCCTTATAGCAAAGCTAATCAAGCTGATAGACTTGATAAGTTGATTCTTTCTAGAAGCTCACAGAATTCTCCTAAGACTCTTTCTTGGGAAGAGGAAGATGCATTGAATACACAATCTTCATCTTCTTCTTCTTATGTTGCAGCACCTCAAGAGGGGCTAAGGCAAGCTGACAAGATTGTCACATTGCCTGGTCAACCCTATGGAGTGAATTTTGACCAATACTCTGGCTATGTCAATGTTTATCCTGAAACTGGAAGAGAACTTTTCTATTATTTTGTTGAATCTCCATATAACCCTTCAACAAAACCTTTAGTATTATGGCTCAATGGAGGACCTGGTTGCTCCTCACTTGGGTATGGAGCATTTGAGGAGCTAGGACCCTTCAGAATCAACTCTGACGGCAAAACACTATACCGAAACCAATATGCTTGGAATGAAGTGGCAAATGTACTCTTCTTGGAGTCTCCAGCAGGAGTAGGATTTTCCTACTCAAACACAACTTCTGATTATGACAAATCAGGAGATAAGAGAACTGCTCAAGATGCTTATGTCTTCCTAATCAACTGGCTAGAGAGATTTCCAGAATACAAAACTAGAGATTTTTACATAACTGGAGAGAGTTATGCTGGTCACTATGTTCCTCAACTCGCATCCACTATTCTTCACAACAATAAACTCTACAACCAAACCATTAACCTCAAAGGCATTTCTATAGGGAATGCTTGGATTGATGATGCCACAGGTTTACAAGGGTTATATGATTACTTTTGGACTCATGCATTGAATTCAGATCAAACACATGAGTTGATTGAGAAGTATTGTGACTTCACTACTCGAAATCAATCAAAAATATGTATCAATGCAACCGATAAGGCCTTAATTGAGAAAGGAAACATAGACTTCTATAACATCTATGCTCCAAAGTGTCATGACTCTTCTCTCAAAAATGGTTCAACTGGTTATGTAACTAATGATTTTGACCCTTGTTCTGATCACTATGGCATTGCCTATCTAAATAGACCAGAGGTTCAAAAGGCTCTTCATGCAAAGCCTACAAATTGGAGCCATTGCAGTGATCTTTATTACAAATGGAAAGACAGTCCAATTACCGTCCTACCTACAATCAAGTATCTCATCGATAACGGCATTAAATTATGGATATACAGTGGTGATACAGATGCAAGGGTTCCAGTCACATCTTCTAGATATTCGATCAACAAACTCAAACTTCCTATCAACTCTGCTTGGCGTCCGTGGTATTCAGGAAAAGAGATTGGAGGATATGTGGTGGGATACAAAGGATTGACATTTGTTACAGTAAGAGGAGCAGGACATATTGTTCCAAGCTGGCAACCAGAAAGGGCTTTGATTTTGATCTCATCATTCCTCTATGGAAGCCTGCCTACTGTTACACCATCAAATTAA 1485 0.3859 MKKVSLYACLLLNLSFLVIFPYSKANQADRLDKLILSRSSQNSPKTLSWEEEDALNTQSSSSSSYVAAPQEGLRQADKIVTLPGQPYGVNFDQYSGYVNVYPETGRELFYYFVESPYNPSTKPLVLWLNGGPGCSSLGYGAFEELGPFRINSDGKTLYRNQYAWNEVANVLFLESPAGVGFSYSNTTSDYDKSGDKRTAQDAYVFLINWLERFPEYKTRDFYITGESYAGHYVPQLASTILHNNKLYNQTINLKGISIGNAWIDDATGLQGLYDYFWTHALNSDQTHELIEKYCDFTTRNQSKICINATDKALIEKGNIDFYNIYAPKCHDSSLKNGSTGYVTNDFDPCSDHYGIAYLNRPEVQKALHAKPTNWSHCSDLYYKWKDSPITVLPTIKYLIDNGIKLWIYSGDTDARVPVTSSRYSINKLKLPINSAWRPWYSGKEIGGYVVGYKGLTFVTVRGAGHIVPSWQPERALILISSFLYGSLPTVTPSN 494
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02573 494 Gene3D alpha/beta hydrolase 74 331 IPR029058 -
Trre5g02573 494 FunFam Carboxypeptidase 348 487 - -
Trre5g02573 494 SUPERFAMILY alpha/beta-Hydrolases 76 486 IPR029058 -
Trre5g02573 494 Gene3D - 349 380 - -
Trre5g02573 494 PRINTS Carboxypeptidase C serine protease (S10) family signature 160 172 IPR001563 GO:0004185|GO:0006508
Trre5g02573 494 PRINTS Carboxypeptidase C serine protease (S10) family signature 173 183 IPR001563 GO:0004185|GO:0006508
Trre5g02573 494 PRINTS Carboxypeptidase C serine protease (S10) family signature 209 234 IPR001563 GO:0004185|GO:0006508
Trre5g02573 494 PRINTS Carboxypeptidase C serine protease (S10) family signature 455 468 IPR001563 GO:0004185|GO:0006508
Trre5g02573 494 ProSitePatterns Serine carboxypeptidases, serine active site. 223 230 IPR018202 GO:0004185
Trre5g02573 494 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 80 472 IPR001563 GO:0004185|GO:0006508
Trre5g02573 494 FunFam Carboxypeptidase 391 485 - -
Trre5g02573 494 Gene3D - 391 485 - -
Trre5g02573 494 ProSitePatterns Serine carboxypeptidases, histidine active site. 455 472 IPR033124 GO:0004185
Trre5g02573 494 FunFam Carboxypeptidase 73 331 - -
Trre5g02573 494 Pfam Serine carboxypeptidase 83 483 IPR001563 GO:0004185|GO:0006508
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Trre5g02573 Trre-Chr5 20169491 20172129 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g02573 346 485 Calmodulin-binding Proteins AT2G22960 30.612 8.87e-13 65.1