Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02539 ATGGGACGTGAGATTGTTAAGCAAGAATCTCCTAAACACCTTGGAAAAAGAAGTCGATTATGGGATCCTGAGGAAGTGTATGATGTATTGAAATATAACAAGGGAACTAAAGTTGTTGAAGTTATAAGTTTCGATATCGATACTGCTAAAACTGAGGATCTATACTTGAGCTCAGATTCCTTTAGAAGCATGATCAACTTAAGATATCTTTATATCACCTATCCTGTCCACTTCCCTAAAGGTCTTGAATGGTTATCTGATAAATTGAGCAAGCTTACAAAGCTTTGGGATGGAATTCAGAACCTGCACAATTTAGTGGAGATTGATCTTGGATACTCTGATGACCTGATTGAGATCCCAGACTTATCAAGGGCACCAAATCTTCAAATAGTGAATCTGAATTCTTGTGAGAGTCTCCGTGAACTCCATCCATCTGTTTTCACTAGCCCCAAGCTTAGAGAACTTCATTTATGTCATTGCAGAAAGATTAAAAGCCTGAAAACTGACATTCATTCAAAATCTCTCCAAAAAGTCGTTCTTTGGGATTGTTCATCTCTTGTGGAATTTTCAGTGACATCGGATGAAATGATATCGTTGTCTTTAAATGGCACCGCTATACATGAATTTCCTTCATCAATATGGCATAATAGCAAGCTCGATGATCTCGATCTAGGGGACTGTGTGAAGCTTAACATTGTTAGAAAGAAGTTATCAACTGATCTAGGATTGATGTTTGTTAGAAAATTGGACCTATCAGGATGCACTGAAATCAATACATCTAATTTGTGGTTCATCCTTGATGGCATGCCATCTTTATATGATCTAAATTTGAGAAGGTGCTGCAACTTAGAAACTCTCCCCAATAACATCCAAAACAATTCTTTATTAGAAATTCTTGAATTAGATGGATGTAGTAAACTGAAGTCCCTACCAAAGCTTCCTACATCCTTGAGACAATTGACAGCTGTTAACTGCACTTATCTAGACACAAACATATTACACAGATTCCACTTCAGTAAAGATTCCGATACAGGCTTCAAGAAAGAATATGATCCTTTAAAAGTCTGTTACCTTCCAGGTGGCCAAGTTCCCTGCGAGTTTGATTATCAGACAACAAAGGCTTCAATAGACATCCCCCCTATTCCAAAACCTGGCTTGTGTGGTTTCATTTTTTGCATCGTTCTCTCTAAGGGCTTTAATTGTTATGGTCAAAGAGTAGATTGTACTATCTATGAGCATGGAAAAGAAATCCTTCACTTGAAAAAACTTTTTGTCATTGATAATACTTTTAGAAATGGAGAGGCAGAGACATTAATTTTAGATCATGTATTGTTATGTTCCGGGTCTGGTGGTAATTACAAATTGGTGAATATGGGGAATGAAAGTGATCATTACAGCCTTTCATTTGAATTCAAACATTTGGATCCTAAACAAATGTACTATGATTATGGCATGGAAGAATGGTCAAGTAAGGGGATAAAGGGTTGTGGTGTCTTCCCTGTATATGCCTTGAAACATAGTGGAGTTGAAATTGTTGAATTACAATCCAGTTCTCAATTCTCTCATGAGTCTGATATTAATGAGTTTGATATTTATGAATCTGAAATTGATGAGTCTGAATCTGATAGAGTTGATATTGTTGAACTACAATTCACATTCAGTGGTCAAGTCTCAGATGAGTCTGATCAACAAATTATTCCCCGGAAAGAAAAGGAGGCACTTCGGATGAGAATGAAGTTGAAGTTAAAGGCTCTACAGATGAAAATGAAGATGAATATCAAGAAGTTAATATTCCCTCAGAGTCGAAACAAAAGAGGAGGACTTGAATGA 1830 0.3661 MGREIVKQESPKHLGKRSRLWDPEEVYDVLKYNKGTKVVEVISFDIDTAKTEDLYLSSDSFRSMINLRYLYITYPVHFPKGLEWLSDKLSKLTKLWDGIQNLHNLVEIDLGYSDDLIEIPDLSRAPNLQIVNLNSCESLRELHPSVFTSPKLRELHLCHCRKIKSLKTDIHSKSLQKVVLWDCSSLVEFSVTSDEMISLSLNGTAIHEFPSSIWHNSKLDDLDLGDCVKLNIVRKKLSTDLGLMFVRKLDLSGCTEINTSNLWFILDGMPSLYDLNLRRCCNLETLPNNIQNNSLLEILELDGCSKLKSLPKLPTSLRQLTAVNCTYLDTNILHRFHFSKDSDTGFKKEYDPLKVCYLPGGQVPCEFDYQTTKASIDIPPIPKPGLCGFIFCIVLSKGFNCYGQRVDCTIYEHGKEILHLKKLFVIDNTFRNGEAETLILDHVLLCSGSGGNYKLVNMGNESDHYSLSFEFKHLDPKQMYYDYGMEEWSSKGIKGCGVFPVYALKHSGVEIVELQSSSQFSHESDINEFDIYESEIDESESDRVDIVELQFTFSGQVSDESDQQIIPRKEKEALRMRMKLKLKALQMKMKMNIKKLIFPQSRNKRGGLE 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02539 609 Gene3D Ribonuclease Inhibitor 196 335 IPR032675 -
Trre5g02539 609 Gene3D Ribonuclease Inhibitor 43 195 IPR032675 -
Trre5g02539 609 Coils Coil 568 588 - -
Trre5g02539 609 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 232 IPR044974 GO:0006952
Trre5g02539 609 SUPERFAMILY L domain-like 55 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02539 Trre-Chr5 19843469 19845647 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g02539 2 324 WRKY Transcription Factor Family AT4G12020 29.428 2.48e-25 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02539 - - cam:101499873 444.891