Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02531 ATGGGTGGCATAGGAAAGACCACTCTAGCTAAAGATTTATATGTTAAAATGTGTTCTCAATTTGATCGTCATTGCTTCATCGAAAATGTAAGGGAAGAATCAACCAGGCGTGGACTCAATGTTGTACGTAACAAACTTCTTACTACATTGTTGGAACTTAGACTTGATGCACCTGACGTAGAAACCCCAATTTTCATAAGAAAACTTGCATGTGAAAAAAGTTTAATTGTTTTGGATGATGTGGCAACTTTAGAGCAAGCAGAATATCTTAATAATATGTGCTTGGGACCAGGTAGTAGAGTCATTGTCACAACTAGAGATAAGCAAATATTTAGTCAGTTTGATGAATGCCTAATTTATGAGGTTGAAGGATTGGACGAAGATGACTCTCTTCAACTATTCTGTTGGCATGCCTTCCCGAAAAAACACGCTAAAGTTGGATATGAAGAGCTCATAGAAAGGGCAATTCGGTATTGCAGAGGCAATCCTCTGGCTTTAAAAGTTTTAGGTGGGAATTTCCGTACAAAAAGCAAAGAAGTGTGGGAAAGTGAATTGGAGAAGCTCAAAAAGATTCCTAATAGGACAATTCAGGATGTGTTAAGATTGAGTTTCGATGATTTAGATCGTACTCAACAGGACATATTTCTAGACATTGCATGCTTCTTTGGCTCTCGGGCAGATAACATATATTTTAGTGATGGGGGTTACTTAACAGTTTTATTAGAAGCTTGCAATTTTTTTGCAGTAAGTGGGATAGAAGTCCTTCTAAATAATGCACTCATAACTCGTAATGATGATGAAATTGAAATGCATGATTTGTTAGTAGAAATGGGACGAGGGATTGTTAACCAAGAAAATTGCCCTGGAAAAAGAAGTCGATTATGGGATCCTAAGGAAGTGTATGATGTATTCAAATATAACAAGGGAACTGATGTTGTTGAAGTTATAAGTTTCGATATCCATATTTTTAAAATTAAGGATCTATACTTGAGCTCTGATTCTTTTAGAAGCATGATCAACTTAAGATATCTTCATATCAACTATGATGTTAAAATTAGAAGCAAAGTGCACTTCCCTAAAGGTCTTGAATGGTTATCTGATAAATTGAGGTACCTTCATTGGGAAGTATTTCCACTCGAATCTTTACCATCAACCTTTTGTCCTGAAATGCTTGTAGTACTTAGCATGACCCGTAGCAAGCTTAGAAAGCTTTGGGATGGAATTCAGAAGTTGGGCAATTTAAGGATGATTGATCTTGATTACTCTAGCAACCTGATTGAGATCCCAAACTTATCAAAGGCACCAAAGCTTCAAATAATATCTCTTAACAATTGTGAGAGTCTCCGTCAACTCGATCCATCTGTTTTCACTCGCCCCAAGCTTAGAAAACTACTCTTAAGTGGTTGCACAAAGATTAAAAGCCTGAAAACTGTCATTCATTCAGAATCTCTCGAAGTACTCAATCTCTCTAATTGTTATTCGCTTGTTGAGTTTTCAGTGACATCGGAGGAAATGATGTCGTTGACGTTAAGTGGCACCGCTATACGTGAACTTCCTTCATCGATATGGTGTAATAGCAAGCTCACTTATCTCAATCTAGGTGGATGTGAGAAGCTTAACATTGTTAGGAAGAAGTTATCAACTGATCTAGGATTGAGGTCTCTTACATATTTGAACCTTTCAGGATGCACTGAAATCAATACATCGAATTTGTGGTTCATCCTTGATGGCACGCCATGTCTATATAATCTAGATTTGAAAAAGTGCTGCAACTTAGAAACCCTCCCGGATAACATCCAAAACAATTCATTATTAGAAATTCTTAAATTAGATGAATGCAGTAAACTTAAGTCCCTACCAAAGCTTCCTACATCCTTGAAACAATTGACAGCTTTTAACTGCACTTATCTAGACACAAACATATTACACAGATTCCACTTCAACAGAAATTCCTATCACATAAATTCCTATCATAGGGATATCTGTTACCTTCCAGGTGGCCAAGTTCCCTGCGAGTTTGATTATCAGACAAGAAAGGCTTCAATAGACATCCCCCATATTCCAAAATCTGGCTTGTGTGGTTTTGTTTTTTGCATCGTTCTCTCTGAGGGCTTAAATTTTCGTAAGCAAAGAGTAGGTTGTACTATCTATGAGCATGGACAAGAAATCCTTCACTTGAAAGAACTTTTTGTCATTGAAAATACTTTTGGAAAGGCAAAGACATTAATTTTAGATCATGTATTGTTATGTTCCTGGTCCGGTGATGAATACAATCAGGTGAATATGGGGAATGAAAGTGGAGGTGATCATTACAACCTTTCATTTGAGTTCAAACATTTGGTTCCTGGTGGCGAATATGCTGATGTTGGCGAGGAAGAATGGTCAAGTAAGGGGATAAAGGGTTGTGGTGTCATCCCTGTATATGGCTTGGAACATAGTTTGCGGTTGGATGGTAGAAGTAGTAGTGGAGTTGAAATTGTTGAATTACAATCGAGTGCTCAAGTTTCTCTTGAGTCTGAAATTGATGAAAATGTTGAAGATGAGGATGATATATTAAAGTTACTAAATCGATTAATTTTAGTTCAGTTGGATGTTGATGAGTCTGATATTGAAGAGTTACTACTACTAGATGAAGTAAAAAAAGCTAGTTCTGTTTTTGATTTGTCTGATATTGTTGAGTTAATACATCAAGCAATTGGAGCTGAGTTGGATGTTGATGAGTCTGGTATTAAAGAGTTACTACCGCAAGCATTTGAAGCTGGTTTTGATATTGATAAGTCTGATATTGTTGAGTTAATACATGAAGCAATTGGAGATGAGTTTGATATTGATGAGTCTGATATTGTTGAGTTACTACCTGAAGGATATGGAGGTGAAGATAGAGACCAACAACAAATTCCCCCAAAAGAAAAGGAGGCTCTATTGATGATAATGAAGTTGAAGTTAGAGGCTCTACCAATGAAAATCAAGATGAACAACAGGATGTTAATAGCATTCTTATTTTTGTTGGAAGTAACCCTCTTGTTAATATGTAGAGGCTCTACAGATGAAAAAGAAAAAGAGAACTTGGATGATAAATCTTGTTGTGCATGCTCAATTGGTCTTTTGTTGCAACATCTTCTAGAAGAGTTTAAACGTTATTTCTCTTGA 3150 0.3648 MGGIGKTTLAKDLYVKMCSQFDRHCFIENVREESTRRGLNVVRNKLLTTLLELRLDAPDVETPIFIRKLACEKSLIVLDDVATLEQAEYLNNMCLGPGSRVIVTTRDKQIFSQFDECLIYEVEGLDEDDSLQLFCWHAFPKKHAKVGYEELIERAIRYCRGNPLALKVLGGNFRTKSKEVWESELEKLKKIPNRTIQDVLRLSFDDLDRTQQDIFLDIACFFGSRADNIYFSDGGYLTVLLEACNFFAVSGIEVLLNNALITRNDDEIEMHDLLVEMGRGIVNQENCPGKRSRLWDPKEVYDVFKYNKGTDVVEVISFDIHIFKIKDLYLSSDSFRSMINLRYLHINYDVKIRSKVHFPKGLEWLSDKLRYLHWEVFPLESLPSTFCPEMLVVLSMTRSKLRKLWDGIQKLGNLRMIDLDYSSNLIEIPNLSKAPKLQIISLNNCESLRQLDPSVFTRPKLRKLLLSGCTKIKSLKTVIHSESLEVLNLSNCYSLVEFSVTSEEMMSLTLSGTAIRELPSSIWCNSKLTYLNLGGCEKLNIVRKKLSTDLGLRSLTYLNLSGCTEINTSNLWFILDGTPCLYNLDLKKCCNLETLPDNIQNNSLLEILKLDECSKLKSLPKLPTSLKQLTAFNCTYLDTNILHRFHFNRNSYHINSYHRDICYLPGGQVPCEFDYQTRKASIDIPHIPKSGLCGFVFCIVLSEGLNFRKQRVGCTIYEHGQEILHLKELFVIENTFGKAKTLILDHVLLCSWSGDEYNQVNMGNESGGDHYNLSFEFKHLVPGGEYADVGEEEWSSKGIKGCGVIPVYGLEHSLRLDGRSSSGVEIVELQSSAQVSLESEIDENVEDEDDILKLLNRLILVQLDVDESDIEELLLLDEVKKASSVFDLSDIVELIHQAIGAELDVDESGIKELLPQAFEAGFDIDKSDIVELIHEAIGDEFDIDESDIVELLPEGYGGEDRDQQQIPPKEKEALLMIMKLKLEALPMKIKMNNRMLIAFLFLLEVTLLLICRGSTDEKEKENLDDKSCCACSIGLLLQHLLEEFKRYFS 1049
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02531 1049 Gene3D - 124 208 IPR042197 -
Trre5g02531 1049 Gene3D Ribonuclease Inhibitor 482 644 IPR032675 -
Trre5g02531 1049 Gene3D - 1 118 IPR027417 -
Trre5g02531 1049 Gene3D Ribonuclease Inhibitor 303 481 IPR032675 -
Trre5g02531 1049 Pfam Leucine Rich Repeat 391 409 IPR011713 -
Trre5g02531 1049 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 541 IPR044974 GO:0006952
Trre5g02531 1049 Pfam NB-ARC domain 1 190 IPR002182 GO:0043531
Trre5g02531 1049 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 218 IPR027417 -
Trre5g02531 1049 SUPERFAMILY L domain-like 270 703 - -
Trre5g02531 1049 PRINTS Disease resistance protein signature 159 173 - -
Trre5g02531 1049 PRINTS Disease resistance protein signature 409 425 - -
Trre5g02531 1049 PRINTS Disease resistance protein signature 68 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02531 Trre-Chr5 19737314 19740997 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g02531 1 689 WRKY Transcription Factor Family AT5G45050 31.421 4.42e-74 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02531 - - cam:101499873 793.882